TABLE 1.
Oligonucleotide primer and probe sequences for amplification of vap genes from R. equi
| Gene | Primer or probe | Sequence (5′ to 3′) |
|---|---|---|
| vapA | Forward | CATCAACTTCTTCGATAGCTCAGGTA |
| Reverse | GACGCCCACCACAGTACTAACTC | |
| Probe | TCCTCGGCCATATCCAGTCCGGT | |
| vapC | Forward | GGGTCACGCTTGGTGGC |
| Reverse | CCGTATACTGTTCGTCGGCA | |
| Probe | TCGGAGTTCTACGGCCGCACAATAAA | |
| vapD | Forward | CACGAGCCTTTGGGCG |
| Reverse | CATTGAGACCGTTGCGATCA | |
| Probe | TTATTCACTTTCTTGCTCGCGGTGGCT | |
| vapE | Forward | TGAGTACAACGCTGTCGGTCC |
| Reverse | ACGTGCCCCAGCAAACC | |
| Probe | TACTTGAACATCAATCTTTTCGCCGGAGAC | |
| vapF | Forward | CATCAGCTGCTGGCAAAGTACT |
| Reverse | CCCCATGAACCGCATATTG | |
| Probe | CGCCAATCAATAACAATGCCGACGA | |
| vapG | Forward | CACTGCAACCCCGGGA |
| Reverse | GGCGGCGGAAAGACGT | |
| Probe | TCGAAATCCCGCCAGAATCACCA | |
| vapH | Forward | GTCAACTTCTTCGACGGTCACA |
| Reverse | ACGGAGCTCACCCCTCCTA | |
| Probe | CGCCATACTCGGCCATGCACAA |