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. 2007 Feb 2;6(4):721–733. doi: 10.1128/EC.00338-06

TABLE 1.

Genome analysis summary

Parameter Value
Assembly
    No. of contigs 5,407
    Mean contig length (bp) 1,386
    Assembly size (Mb) 7.6
    Estimated genome size (Mb) 19.4
    % of genome sequenced ∼40
Gene content
    Genes with S. cerevisiae orthologs 2,606
    Genes without S. cerevisiae orthologs 278
    Lineage-specific gene duplicates 89
    tRNAs 24
    Retrotransposons, Ty1-like 3
    Retrotransposons, Ty3-like 16
    Retrotransposons, Ty5-like 13
    Estimated total no. of protein-coding genes ∼7,430
Genome architecture
    Mean intergenic length (bp) 945
    Introns, % genes in which present 2
    Introns, mean length (bp) 195
    % GC content (S. cerevisiae value)
    Introns, genome 40.2 (38.3)
    Introns, coding 42.9 (39.7)
    Introns, GC3 44.2 (37.0)
    Introns, intergenic 39.1 (33.2)
    Introns, intronic 34.7 (33.8)
    Di/trinucleotide microsatellites 48