TABLE 1.
Protein | Amino acid positions | Short name | Sequence | MHC class I restriction | Earliest detected viral variation (wk) |
---|---|---|---|---|---|
Tat | 28-35 | SL8 | STPESANL | Mamu-A*01 | 4 |
Vif | 97-104 | WY8 | WTDVTPNY | Mamu-A*02 | 57 |
Nef | 159-167 | YY9 | YTSGPGIRY | Mamu-A*02 | 4 |
Gag | 71-79 | GY9 | GSENLKSLY | Mamu-A*02 | 59 |
Gag | 181-189 | CM9 | CTPYDINQM | Mamu-A*01 | 18 |
Env | 788-795 | RY8 | RTLLSRVY | Mamu-A*02 | 32 |
Env | 620-628 | TL9 | TVPWPNASL | Mamu-A*01 | 14 |