Table 4.
Conserved Sequences (CSs) between the Human DSCR and the Corresponding Mouse Region
| Total No. of CSs | No. of CSs matched with known exonsa | No. of exons matched with CSs (out of 123 known exons) | |
|---|---|---|---|
| 50 bp | |||
| 75% ID | 1058 (113,607 bp) | 178 (31,159 bp) | 110 |
| 80% ID | 674 (74,892 bp) | 161 (26,751 bp) | 109 |
| 85% ID | 341 (39,592 bp) | 132 (19,574 bp) | 89 |
| 75 bp | |||
| 75% ID | 526 (88,088 bp) | 138 (30,983 bp) | 104 |
| 80% ID | 353 (59,173 bp) | 123 (26,132 bp) | 95 |
| 85% ID | 217 (35,794 bp) | 104 (19,529 bp) | 84 |
| 100 bp | |||
| 75% ID | 408 (86,136 bp) | 128 (32,762 bp) | 103 |
| 80% ID | 254 (53,428 bp) | 110 (25,773 bp) | 90 |
| 85% ID | 156 (31,809 bp) | 84 (18,624 bp) | 73 |
Numbers in parentheses indicate total nucleotide length of CSs. The data was obtained from the analysis using the VISTA program.
a
One exon matched with more than two non-overlapping CSs.