Table 1.
Primers Used in PCR-SSCP Assay of Fas Gene
Primer (site of PCR) | Sequence | Size of PCR product (bp) | Annealing temperature (°C) |
---|---|---|---|
PA-F (promoter) | 5′-ccatcctccttatcccacttcttt-3′ | ||
124 | 60 | ||
PA-R | 5′-gcttgtctctgttccacctttca-3′ | ||
PB-F (promoter) | 5′-ggcgcaacatctgtactttttcat-3′ | ||
145 | 58 | ||
PB-R | 5′-agccttggctaattgctggagt-3′ | ||
1-F (exon 1) | 5′-ctcttctcccgcgggttggt-3′ | ||
171 | 61 | ||
1-R | 5′-cactttgcctatccccgggactaa-3′ | ||
2-F (exon 2) | 5′-gttgcttacttcagaaatcaataa-3′ | ||
249 | 53 | ||
2-R | 5′-actgtaatctctggatgttttgt-3′ | ||
3A-F (exon 3) | 5′-acttcccaccctgttacctg-3′ | ||
192 | 60 | ||
3A-R | 5′-catcacacaatctacatcttctgc-3′ | ||
3B-F (exon 3) | 5′-gtacacagacaaagcccatttttc-3′ | ||
171 | 57 | ||
3B-R | 5′-gtgtcaacatagcaccacagtagg-3′ | ||
4-F (exon 4) | 5′-cgcgataactaatagtttccaa-3′ | ||
228 | 55 | ||
4-R | 5′-ctctcagtcagtgttacttcccta-5′ | ||
5-F (exon 5) | 5′-aattattctgccaggcttttg-3′ | ||
180 | 53 | ||
5-R | 5′-gattggtttttcttcacatctttc-3′ | ||
6-F (exon 6) | 5′-tttcatataatatgccaatgttcc-3′ | ||
145 | 60 | ||
6-R | 5′-cttcccccaagttatttcaat-3′ | ||
7-F (exon 7) | 5′-ctacaaggctgagacctgagtt-3′ | ||
164 | 55 | ||
7-R | 5′-tttcaaggaaagctgatacctatt-3′ | ||
8-F (exon 8) | 5′-ttgtctttctctgcttccatt-3′ | ||
117 | 53 | ||
8-R | 5′-attggcctattactctaaaggatg-3′ | ||
9A-F (exon 9) | 5′-tgctggagtcatgacactaagt-3′ | ||
163 | 50 | ||
9A-R | 5′-caatgtgtcatacgcttctttc-3′ | ||
9B-F (exon 9) | 5′-taattggcatcaacttcat-3′ | ||
175 | 49 | ||
9B-R | 5′-gaatttgttgtttttcactcta-3′ | ||
9C-F (exon 9) | 5′-ggttttcactaatgggaatttcat-3′ | ||
191 | 50 | ||
9C-R | 5′-cttcattgacaccattctttcg-3′ |
F, forward primer; R, reverse primer.