Table 1.
VS ribozyme cleavage rates measured under standard conditions for different substrates
| Substrate | Rate (min−1) | Error (min−1) | Relative decrease |
|---|---|---|---|
| Natural | 0.72 | 0.15 | 1 |
| A621G | 0.018 | 0.002 | 40 |
| A622U | 3.3 × 10−4 | 7 × 10−5 | 2200 |
| A639G | 0.42 | 0.06 | 1.7 |
| G638A | 9.9 × 10−5 | 9 × 10−6 | 7300 |
| G638C | 9 × 10−5 | 1 × 10−5 | 8400 |
| G638U | 6 × 10−5 | 1 × 10−5 | 12 000 |
| G638 purine | 9.0 × 10−5 | 9 × 10−6 | 8000 |
| G638 diaminopurine | 4.6 × 10−4 | 2 × 10−5 | 1600 |
| G6382 aminopurine | 8.5 × 10−5 | 7 × 10−6 | 8500 |
| G638 inosine | 0.026 | 0.004 | 27 |
| G638A, C755Aa | 8 × 10−5 | 1 × 10−5 | 9100 |
| G638A, C755Ga | 7 × 10−5 | 2 × 10−5 | 9800 |
| G638A, C755Ua | 9 × 10−5 | 3 × 10−5 | 8200 |
| The rate of cleavage of the G638A substrate was measured using variant ribozyme in which C755 was replaced by adenine, guanine or uracil. | |||