Table 3.
Reference sequence CSAV 2.0 (this work) | Original WGS assembly | Non-redundant 1.0 | |
---|---|---|---|
Total length (Mb) | 174 | 402 | 157 |
Scaffold N50 (kb) | 1,779 | 496 | 988 |
Contig N50 (kb) | 116 | 17 | 47 |
Number of scaffolds | 374 | 33,623 | 446 |
Number of scaffolds >3 kb | 374 | 4,123 | 444 |
Number of contigs | 4,620 | 66,800 | 8,183 |
Gap bases in scaffolds | 1.7% | 5.6% | 4.3% |
kb, kilobases; Mb, megabases; WGS, whole-genome shotgun.