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. 2007 Feb 25;35(6):1761–1772. doi: 10.1093/nar/gkl1122

Table 3.

Salt dependence of IHF binding to de novo synthetic sites

Site ΔVspeca (ml mol−1) [NaCl] (mM) ΔGspec (kcal mol−1) Inline graphic
A.2 112 100 −13.6 ± 0.08 1.06
200 −12.5 ± 0.05
400 −9.6 ± 0.13
A.3 131 ± 9.3 50 −13.0 ± 0.25 1.05
100 −12.3 ± 0.21
200 −9.8 ± 0.09
A.6 154 ± 8.0 50 −13.7 ± 0.22 1.00
100 −13.2 ± 0.19
200 −11.4 ± 0.15

Note: Values of the volume change (ΔVspec) and free energy change for specific binding (ΔGspec) were obtained by global analysis of pressure perturbation curves obtained at varying NaCl concentration using 50 nM IHF and 10 nM DNA oligonucleotide, as described in the text.

aΔVspec was held constant vs. NaCl concentrations for each oligonucleotide as discussed in the text. The value was poorly resolved in the analysis of oligonucleotide A.2, and so was held fixed at the value obtained from analysis of the data at 100 mM NaCl in Table 1.