Table 5.
Cleavage rates for the B. subtilis wild-type RNase P holoenzyme acting on substrates with 3′-end variations at low magnesium concentrations
ptRNAGly | Enzyme concentration | [Mg2+] | kobs | krel |
---|---|---|---|---|
U73 | 10 nM P RNA/ 37 nM RnpA | 4.5 | 4.3 ± 0.08 | 0.36 |
U73UAAAUA | 10 nM P RNA/ 37 nM RnpA | 4.5 | 3.3 ± 0.05 | 0.28 |
U73CCAAUA | 10 nM P RNA/ 37 nM RnpA | 4.5 | 11.8 ± 0.15 | 1.0 |
U73 | 10 nM P RNA/ 37 nM RnpA | 2.0 | 1.5 ± 0.01 | 0.21 |
U73UAAAUA | 10 nM P RNA/ 37 nM RnpA | 2.0 | 1.4 ± 0.01 | 0.2 |
U73CCAAUA | 10 nM P RNA/ 37 nM RnpA | 2.0 | 7.0 ± 0.04 | 1.0 |
U73 | 50 nM P RNA/ 185 nM RnpA | 2.0 | 9.5 ± 0.08 | 0.19 |
U73UAAAUA | 50 nM P RNA/ 185 nM RnpA | 2.0 | 6.8 ± 0.03 | 0.13 |
U73CCAAUA | 50 nM P RNA/ 185 nM RnpA | 2.0 | 49.9 ± 0.43 | 1.0 |
For assay conditions, see legend to Table 4; krel is defined as the ratio of kobs obtained with the mutant versus canonical (U73CCAAUA) substrate under the respective conditions; values are based on at least four independent experiments.