Table 4.
GO Function Prediction Coverage Summary for musDoTS (M. musculus EST assemblies) with Similarity to NRDB as a Function of the Domain Database and Use of IEA Annotation
| Rule groupa | Number of assemblies with prediction(s)b | Number of predictionsc | Average number of predictions per assemblyd | Average depth of predictionse |
|---|---|---|---|---|
| ProDom-NoIEA | 9633 (28%) | 44219 | 4.6 | 3.3 |
| ProDom-All | 11721 (35%) | 53386 | 4.6 | 3.3 |
| CDD-NoIEA | 10074 (30%) | 44423 | 4.4 | 3.1 |
| CDD-All | 10771 (32%) | 47996 | 4.5 | 3.2 |
| UNION-NoIEA | 12711 (37%) | 64818 | 5.1 | 3.3 |
| UNION-All | 14013 (41%) | 73276 | 5.2 | 3.4 |
a
Domain database and type of GO associations used to build rules. bNumber and percent of EST assemblies for which a prediction was made. cTotal number of GO function terms predicted. dAverage number of GO function terms predicted per assembly. eAverage number of depth of predicted GO functions terms.