Table 4.
Sequence Similarity Between Rice Sequences and Genes From Other Cereal Species
| Cereal NBS Family* | Most Similar Rice Sequence** |
|---|---|
| mNBS1 Zea | AF032688 84% |
| mNBS2 Zea | rNBS6, In37394 71% |
| mNBS6 Zea | In7573 64% |
| AF056150Zea | In7573 59% |
| AF056152Zea | In55234 75% |
| AF056155Zea | AP003914, In20630 58% |
| AF056161Zea | AP003280, In930 85% |
| AF107293Zea (Rp1) | AP003368 72% |
| AF056153 | AP003449, In17424 74% |
| AF056159 | In1613 56% |
| AF325196Triticum | In1613 59% |
| AF320290 (85%) Secale | |
| AF108008 (81%) Hordeum | |
| AF108011 (81%) Hordeum | |
| AF108012 (83%) Hordeum | |
| AF108013 (81%) Hordeum | |
| AF108015 (80%) Hordeum | |
| AF108010Hordeum | In7323 65% |
| AF078873Avena | In4386 78% |
| AF032679 (84%) Hordeum | |
| AF032682Hordeum | AF032688 81% |
| AF087519 (91%) Triticum | |
| AJ296001 (87%) Avena | |
| AF032684Hordeum | In8824 (62%) |
| AF032686Hordeum | In10315 60% |
| AF032687Hordeum | AP003948, AP003914 67% |
| AJ302298Hordeum | In23808 55% |
| AY009939 (84%) Hordeum (Mla1) | |
| AJ302296 (77%) Hordeum | |
| AF032685Hordeum | AC099734 61% |
| AF149114Triticum | In5429 60% |
| AF052641Triticum | In9457 53% |
| AF158635 (82%) Triticum | |
| AF158634Triticum | In7095 59% |
| AF087521Triticum | In20889 85% |
| AF325198Triticum | In1613 59% |
| AJ295999Avena | In24620 77% A220741 77% |
| TVE249945 73% Aegilops | |
| TVE249944 74% Aegilops | |
| AF087518 74% Triticum | |
| AF087520 81% Triticum | |
| AF032683 78% Hordeum | |
| AF032680 75% Hordeum | |
| AJ249948Aegilops | In6820 63% |
| AJ249949Aegilops | In6820 66% |
| AJ249943Aegilops | In10362 70% |
| AJ296002 79% Avena | |
| AJ295998Avena | AF032692 64% |
Cereal sequence, or family of related sequences, with a predicted NBS coding region. When families of related sequences are listed, the top sequence shows the highest identity to a rice sequence. Numbers in parentheses next to other sequences give their identity (% amino acid) to the top family member.
Accession no. of the rice sequence that exhibits the highest sequence identity. Accession nos. starting with ‘A’ are GenBank accessions, and an ‘In’ prefix indicates the Indica sequence database. Percentages indicate the % amino acid identity for at least 155 amino acids, typically from the P-loop to the GLPL domain. Cereal sequences that did not include this entire region were not examined.