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. 2000 May;156(5):1749–1765. doi: 10.1016/S0002-9440(10)65046-8

Table 1.

Primers and Probes Used in RT-PCR and Southern Blot

Reference no. GenBank no. Oligo sequence 5′→3′ Base pair number Fragment length MgCl2 concentration Annealing temp. (°C)
Agrin N-terminus 38, 39 M64780 Forward primer GCC GTA TAG GTG CAA CCC G 998-1016 101 2.5 62
Reverse primer TAC GGA GTT AAA CTG GCA GGT CT 1098-1076
Probe AAA GTA CGC TCT GGT CAA TGC CAA 1033-1056
Agrin C-terminus 38, 39 M64780 Forward primer TTC GAA TCA GGG CTC ACA GG 5744-5763 101 0.5 62
Reverse primer GTC CAG TTG CGT GGC ACC 5844-5827
Probe AGC CCC TGT GAC TGG ATC TTC C 5799-5820
Dystroglycan 40 H35660 Forward primer TTT GGA AGA AAC CAT TTT GAG CAT 95-118 101 1.0 54
Reverse primer CAG GGA AGG GAT ACA TTA TTG CA 195-173
Probe GTA CCT TTT AGG GAG GAA TGC CTT TT 148-173
Utrophin 41, 42 Y12229/ Forward GCC CAC AAT GAC ATA TTT AAA AGC AT 7492-7517 (Y12229) 154 1.0 54
X69086 primer 7501-7526 (X69086)
Reverse CCC TGA TGC TAG CAG ATT TTG C 7645-7624 (Y12229)
primer 7654-7633 (X69086)
Probe CGG CAG AAG ATG GTG AAA GCT CT 7528-7550 (Y12229)