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. 2007 Mar 9;92(12):4325–4334. doi: 10.1529/biophysj.106.099242

FIGURE 1.

FIGURE 1

Flow chart of the docking procedure. (A) Low-resolution docking, which involved the GRAMM program. (B) The solutions from GRAMM were clustered at 3 Å. (C) High-resolution docking, which included an iterative rigid body and side-chain optimization followed by minimization. (D) Distance cutoffs were imposed. (E) Energy cutoffs were imposed.