Assaying for intramolecular interactions. (a)
Nondenaturing 20% PAGE of 32P-labeled repeat a in the
absence of salt. The first lane contains the 14-, 20-, and 56-mer
markers. The rest of the eight lanes labeled 1–8 contain 0.5–4.0
copies of repeat a in increments of 0.5 repeat. For example, lane 1,
0.5 repeat, ACAGGGG; lane 2, 1.0 repeat, ACAGGGGTGTGGGG; etc.
(b) Same as a, but in the presence of 100
mM NaCl. (c) Same as for b except lanes
1–8 are repeats b and lanes 9–16 are repeats variant b.
(d) Same as for b except lanes 1–8 are
repeats c and lanes 9–16 are repeats variant c.