Table 3.
Bond-length and bond-angle values for polyalanine chains*
| Atom name | Atom description | Bond type | Bond length, Å | Angle type | Bond angle |
|---|---|---|---|---|---|
| C(sp3) | sp3 carbon atom | C(sp3)–C′ | 1.525 | H–C(sp3)–C′ | 109.6° |
| C′ | Peptide group carbonyl carbon | H–C(sp3) | 1.08 | C(sp3)–C′–N | 116.2° |
| O | Peptide group carbonyl oxygen | C′–O | 1.231 | O–C′–C(sp3) | 120.5° |
| N | Peptide group amide nitrogen | N–C′ | 1.329 | O–C′–N | 123.3° |
| Cα | Backbone α carbon | N–H | 1.008 | C′–N–H | 119.15° |
| H | Hydrogen atom | N–Cα | 1.458 | C′–N–Cα | 121.7° |
| Cα–C(sp3) | 1.521 | N–Cα–C(sp3) | 110.4° | ||
| C–C′ | 1.525 | H–C(sp3)–Cα | 109.6° | ||
| N–C(sp3) | 1.458 | C(sp3)–Cα–C′ | 110.5° | ||
| Cα–C′–O | 120.5° | ||||
| Cα–C′–N | 116.2° | ||||
| C′–N–C(sp3) | 121.7° | ||||
| N–C(sp3)–H | 110.0° | ||||
| H–N–C(sp3) | 119.15° | ||||
| H–C(sp3)–H | 109.6° |