Table 9.
High-differentiation non-synonymous SNPs
| Chromosome | Position (base number) | Gene* | SNP |
|---|---|---|---|
| 1 | 54,772,383 | THEA | rs1702003 |
| 1 | 156,000,000 | FY | rs12075 |
| 1 | 244,000,000 | Q8NGY8_human† | rs7555046 |
| 2 | 3,184,917 | COLEC11 | rs7567833 |
| 2 | 73,563,622 | ALMS1 | rs3813227 |
| 2 | 73,589,553 | ALMS1 | rs6546837 |
| 2 | 73,591,645 | ALMS1 | rs6724782 |
| 2 | 73,592,163 | ALMS1 | rs6546839 |
| 2 | 73,629,222 | ALMS1 | rs2056486 |
| 2 | 73,629,311 | ALMS1 | rs10193972 |
| 2 | 109,000,000 | EDAR | rs3827760 |
| 3 | 182,000,000 | FXR1 | rs11499 |
| 3 | 185,000,000 | MCF2L2 | rs7639705 |
| 4 | 41,844,599 | SLC30A9 | rs1047626 |
| 4 | 46,567,077 | ENSG00000172895.1 | rs5825 |
| 4 | 101,000,000 | ADH1B | rs1229984 |
| 8 | 10,517,787 | RP1L1 | rs6601495 |
| 8 | 146,000,000 | SLC39A4 | rs1871534 |
| 10 | 50,402,145 | ERCC6 | rs4253047 |
| 10 | 71,002,210 | NEUROG3 | rs4536103 |
| 11 | 46,701,579 | F2 | rs5896 |
| 15 | 46,213,776 | SLC24A5 | rs1426654 |
| 15 | 61,724,262 | HERC1 | rs7162473 |
| 16 | 30,996,126 | ZNF646 | rs749670 |
| 16 | 46,815,699 | ABCC11 | rs17822931 |
| 17 | 26,322,430 | RNF135 | rs7225888 |
| 17 | 26,399,303 | ENSG00000184253.2 | rs6505228 |
| 18 | 66,022,323 | RTTN | rs3911730 |
| 19 | 5,782,891 | FUT6 | rs364637 |
| 19 | 47,723,209 | CEACAM1 | rs8110904 |
| 22 | 18,164,095 | GNB1L | rs2073770 |
| X | 65,608,007 | EDA2R | rs1385699 |
*
Where no standard gene abbreviation exists, the ENSEMBL gene ID has been given.
†
It is unclear from current annotations whether this is a pseudogene.