Table 2.
LRT summary statistics
| 11th class from M8 | M7-M8 | M8a-M8 | Both LRTs | ||||||||||
| Lineage | N c | Tree length d | dS e | dN f | M0 dN/dS g | p,% | dN/dS | Np i | % j | Np I | % j | Np I | % j |
| angiosperms | 122 | 0.56 (0.31) | 0.55 (0.34) | 0.07 (0.04) | 0.17 (0.12) | 3.4 (2.4) | 5.23 (6.56) | 96 | 79 | 103 | 84 | 95 | 78 |
| gymnosperms | 8 | 0.27 (0.27) | 0.26 (0.31) | 0.04 (0.02) | 0.23 (0.12) | 3.2 (2.7) | 8.57 (7.13) | 7 | 88 | 8 | 100 | 7 | 88 |
| ferns and allies a | 9 | 0.96 (1.05) | 0.95 (1.06) | 0.07 (0.05) | 0.10 (0.05) | 1.4 (1.0) | 4.15 (1.68) | 9 | 100 | 7 | 78 | 7 | 78 |
| mosses | 4 | 0.75 (0.48) | 1.35 (0.87) | 0.06 (0.04) | 0.04 (0.00) | 1.6 (2.1) | 3.77 (2.56) | 4 | 100 | 3 | 75 | 3 | 75 |
| algae b | 7 | 3.49 (2.94) | 6.33 (6.25) | 0.15 (0.12) | 0.03 (0.03) | 0.0 | n.a. | 2 | 29 | 0 | 0 | 0 | 0 |
| cyanobacteria | 1 | 2.65 | 3.01 | 0.12 | 0.04 | 1.9 | 1.02 | 1 | 100 | 0 | 0 | 0 | 0 |
| all | 151 | 0.72 (0.95) | 0.87 (1.81) | 0.07 (0.05) | 0.16 (0.12) | 3.1 (2.4) | 5.21 (6.31) | 119 | 79 | 121 | 80 | 112 | 74 |
In the columns three to eight mean values and standard deviations (in brackets) are given.
a Including Filicophyta, Lycopodiophyta and Equisetophyta.
b Including Charophyta, Phaeophyta, Bacillariophyta, Rhodophyta and Euglenida.
c Number of groups analyzed.
d Estimated using M0 model in PAML.
e The rate of synonymous substitutions per synonymous site calculated using M0 model in PAML.
f The rate of nonsynonymous substitutions per nonsynonymous site calculated using M0 model in PAML.
g The ratio of non-synonymous to synonymous substitutions rates (dN/dS) calculated using M0 model in PAML.
i Number of groups with detected positive selection in rbcL among investigated plant lineages. P < 0.05
j Proportion of groups with detected positive selection in rbcL among investigated plant lineages. P < 0.05