Local Deformation of the Lipid Bilayer
This is measured as the average distance between upper and lower P atoms (dPP) versus the distance of the atoms in the xy plane from the center of mass of the corresponding protein (r) over the last 10 ns of each simulation. The dPP versus r curves are given for the VS/PC (black, solid line) and VS/PCPG (gray) simulations. As a control, the dPP versus r curve is given for a simulation of KirBac3.1 in a PC bilayer (black, broken line). The horizontal lines give the corresponding dPP values for two control PC (black dashed) and PC/PG (gray dashed) bilayer simulations in the absence of protein.