Table 5.
Effects of interaction with pro domain residues
Pro domain residues |
Shift in Cα position (Å) | ||
---|---|---|---|
MMP-1 residues | van der Waals interactions | Hydrogen bonds | |
Gly160 | Pro71(2), Arg72 | Gly160 O–Arg72 N (2.9 Å) | 0.87 |
Asn161 | Arg72(2), Gly74(4) | Asn161 ND2–Gly74 N (3.0 Å) | 0.33 |
Leu162 | Pro71(2) | Leu162 N–Arg72 O (2.9 Å) | 0.33 |
Asn163 | Cys73(2), Gly74 | Asn163 O–Gly74 N (2.8 Å) | 0.09 |
His164 | Val75 | – | 0.00 |
Ala165 | Val75(2) | – | 0.17 |
Tyr191 | Pro71(6) | – | 0.00 |
His199 | Cys73(4) | – | 0.36 |
His203 | Cys73(2), Val75(3) | – | 0.50 |
His209 | Phe51, Cys73(4), Val75(4), Pro76, Asp77 | His209 ND1–Asp77 OD1 (2.7 Å) | 0.44 |
Ser210 | Phe51(4) | – | 0.50 |
Thr211 | Phe51(11) | – | 0.79 |
Tyr218 | Phe52(4) | – | 0.85 |
Pro219 | Phe51(3), Phe52(2), Arg72(6), Asp77(3) | Pro219 O–Cys73 N (2.9 Å) | 1.08 |
Ser220 | Gln70(2), Pro71, Arg72(2), | – | 1.18 |
Tyr221 | Pro71 | Tyr221 N–Pro71 O (3.0 Å) | 1.27 |
Phe289 | Lys55, Asp61, Glu63(4) | – | 15.52 |
Tyr290 | Gly53(2), Leu54(2), Glu63(5) | Tyr290 OH–Glu63 OE1 (2.6 Å) | 11.88 |
Pro291 | Gly53, Leu54, Lys55(4) | – | 8.87 |