Table 4.
Five p53REs and proposed p53 coupling modes examined by an empirical weighting matrix
Gene | Sequence | Q1234 | T13 | T24 | H14 | H23 | |
---|---|---|---|---|---|---|---|
p21-5′ | CTATGAG GAACATGTCC CAACATGTTG AGCTC | Sum of fraction | 0.657 | 0.786 | 0.912 | 0.742 | 0.618 |
Population% | 17.69 | 21.16 | 24.54 | 19.96 | 16.64 | ||
Gad45A | TGTACA GAACATGTCT AAGCATGCTG GGGTC | Sum of fraction | 0.821 | 0.983 | 0.912 | 1.110 | 0.698 |
Population% | 18.15 | 21.73 | 20.14 | 24.55 | 15.43 | ||
pDINP1 | TTTATA GAACTTGGGG GAACATGTTT ACCAA | Sum of fraction | 0.597 | 0.919 | 0.633 | 0.896 | 0.457 |
Population% | 17.04 | 26.24 | 18.08 | 25.58 | 13.05 | ||
p53Aip | TCCTCC TCTCTTGCCC GGGCTTGTCG AGATG | Sum of fraction | 0.624 | 0.674 | 1.024 | 0.814 | 0.642 |
Population% | 16.52 | 17.83 | 27.11 | 21.54 | 17.0 | ||
Puma-BS2 | TGCCGC GGACAAGTCA GGACTTGCAG GCGCG | Sum of fraction | 0.599 | 0.930 | 0.660 | 1.416 | 0.559 |
Population% | 14.38 | 22.33 | 15.86 | 34.00 | 13.42 |