Table 1.

Sequence and position of the primers used in PCR amplification, 5′ end mapping, GMSA, and footprinting

Name	Sequence 5′ to 3′	Gene and position
N2	TCCAACCCTAACGATGCTG	NAG1: +19 to +37
N6	CCAGATCTGCGTTGGAAAATATAGCTTG	NAG1: Complementary to +7 to +24, with a 10-bp adapter
N7	TTAAACTCAGCAACATCCTCTGCGG	NAG1: −497 to −473
N9	GTCGGATCCTACCAACACTATGC	NAG1: −1,725 to −1,704
N10	GGTTGATGAGAAATTGGGGTATT	NAG1: Complementary to −1 to −23
N11	GGGGATGACCCGGTTGGAAGG	NAG1: Complementary to +120 to +102
N12	CCATGGCAATATATATATAGGC	NAG1: Complementary to −200 to −179
N13	CCATGGCTGCCCACATCACTTGC	NAG1: Complementary to −195 to −217
N16	CTCAAAAACGTGTTACATTTG	NAG1: −139 to −119
N17	ATGTCATTTACTAGATTCAC	DAC1: +1 to +20
N19	GCGGATGACAAATTCT	DAC1: Complementary to +106 to +91
N30SspI	CCCAGGTGCTAATATTTGC	NAG1: −408 to −390

Bases different from the homologous sequence are in bold. Position +1 refers to translation start codon ATG.