Table 3.
ChIPed DNA sequences that correspond to two potential target genes.
| p63 Binding Fragment | Chromosome Number | Nearest Gene | Location | Description | Accession Number | Gene Ontology |
| A8(a) | 19q13.32 | ZNF541 | 3' end | Zinc finger protein 541 | NM_032255 | Transcription |
| A8(b) | 19q13.32 | NAPA* | 5' end | N-ethylmaleimide-sensitive factor protein | NM_003827 | Transport |
| B1(a) | 6q23.3 | FLJ46906 | 3' end | Hypothetical gene supported by Ak128874; BC071813 | XM_928441 | Unknown |
| B1(b) | 6q23.3 | CCDC28A | 5' end | Coiled-coil domain containing 28A | NM_015439 | Unknown |
| B3(a) | 12q22 | LOC642961 | 3' end | Hypothetical protein | XM_931709 | Unknown |
| B3(b) | 12q22 | MRPL42 | 5' end | Mitochondrial ribosomal protein L42 | NM_014050 | Protein biosynthesis |
| C7(a) | 20p12.1 | WFDC12 | NL | WAP four-disulfide core domain 12 | NM_080869 | Protease inhibitor |
| C7(b) | 20p12.1 | LOC613266 | NL | Hypothetical LOC613266 | ND | Unknown |
| D6(a) | 1q32.1 | Clorf116* | NL | Chromosome 1 open reading frame 116 | NM_023938 | Unknown |
| D6(b) | 1q32.1 | LOC653098 | 5' end | Similar to chromosome 1 open reading frame | XM_925981 | Unknown |
| E10(a) | 1p21-p13 | CSF1 | 3' end | Colony stimulating factor 1 | NM_000757 | Cell proliferation/differentiation |
| E10(b) | 1p13.2 | AHCYL1 | 5' end | S-adenosyl homocystein hydrolase-like 1 | NM_006621 | Adenoyslhomocyteinase |
| G5(a) | 21q22.11 | LOC728598 | 5' end | Similar to oligodendrocyte transcription factor 1 | XM_001127883 | Transcription |
| G5(b) | 21q22.11 | LOC728409 | 3' end | Hypothetical protein | XM_001128368 | Unknown |
| G10(a) | 13q34 | LOC122258 | 5' end | Hypothetical protein | NM_145248 | Unknown |
| G10(b) | 13q34 | LOC400163 | 5' end | Hypothetical protein supported by BC034786 | ND | Unknown |
| H1(a) | 6q15 | CYCSP16 | NL | Cytochrome c, somatic pseudogene 16 | NG_002966 | Unknown |
| H1(b) | 6q15 | RNGTT | NL | RNA guanylytransferase and 5' phosphatase | NM_003800 | mRNA processing |
| H5(a) | 15q24 | CRABP1 | 3' end | Cellular and retinoic acid binding protein 1 | NM_004378 | Signal transduction |
| H5(b) | 15q25.1 | IREB2 | 5' end | Iron-responsive element binding protein 2 | NM_004136 | Metabolism |
Shown are the genes located closest to each p63 ChIPed DNA sequence and the corresponding chromosome number. Also shown are the location of the p63-binding site within each gene, NCBI accession number, and gene function. NL, Not localized; ND, Not determined; Asterisks indicates those genes that were also identified by other studies.