Table 3. Examples of genes whose power spectra show better discrimination between coding and non-coding regions with EIIP indicator sequence mapping than with binary indicator sequence mapping.

No	Gene Name, Acc. No, Description	Regions (Nucleotide positions)	Highest peak (binary slide)	Highest peak (EIIP slide)	Discrimination measure D for binary slide	Discrimination measure D for EIIP slide
1.	F56F11.4a,NC001135, a gene from C. elegans chromosome III	E1(929-1135)	2.1	1.02	1.19	2.0
		E2(2528-2857)	7.01	2.75
		E3(4114-4377)	6.0	2.4
		E4(5465-5644)	5.3	1.1
		E5(7255_7605)	3.4	1.25
		Intron regions	1.77	0.51
2.	HUMBETGLOA L26462, human betaglobin A chain	E1(866-957)	1.86	0.84	1.05	2.4
		E2(1088-1310)	4.34	0.9
		E3(2161-2289)	3.0	1.13
		Intron regions	1.77	0.35
3.	HUMCBRG, M62420, Homosapiens carbonyl reductase gene	E1(276-566)	9.74	1.74	0.55	1.16
		E2(1112-1219)	1.3	0.43
		E3(2608-3044)	6.67	1.0
		Intron regions	2.36	0.37
4.	HUMELAFIN, D13156, Homo sapiens gene for elafin	E1(247-325)	2.05	0.65	0.95	1.55
		E2(1185-1459)	2.72	1.575
		Intron regions	2.15	0.42
5.	GalR2, AF042784 Mus musculus galin receptor type 2 gene	E1(24-388)	9.6	1.27	3.19	14.11
		E2(1449-2199)	3.19	0.917
		Intron regions	1.0	0.09
6.	PP32R1, AF00A216 Homosapiens candidate tumor suppressor gene	E(4453-5157)	30.6	11.92	19.13	21.67
		Intergenic regions	1.6	0.55
7.	HMX1, AF009614, Mus musculus homeobox containing nuclear transcriptional factor gene	E1(1267-1639)	4.76	1.71	2.14	2.80
		E2(3888-4513)	7.09	3.94
		Intron regions	2.22	0.61
8.	PSMB5, AB003306, Mus musculus DNA for PSMB5	E1(1020-1217)	3.82	0.95	1.43	3.17
		E2(2207-2513)	2.10	1.05
		E3(4543-4832)	7.65	2.12
		Intron regions	1.47	0.38
9.	HSODF2, X74614, Homosapiens ODF2 gene	E1(280-599)	3.82	0.865	2.43	4.33
		E2(843-1275)	6.725	1.75
		Intron regions	1.57	0.2