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. 2007 Mar 3;38(1):23–39. doi: 10.1007/s10858-007-9142-1

Table 2.

General parameters for the MD simulations with orientational constraints

Parameter Value
Target temperature 293 K
MD time step 0.5 fs
Coupling time η to the heat bath 0.05 ps
Pseudo-force width ΔP (Eq. 11) 1 kHz
Memory decay time τ for the average (Eqs. 6, 7) 200 ps
Time constant ρ for the exponential rise of pseudo-forces 200 ps
Total MD duration 1 ns