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. Author manuscript; available in PMC: 2007 Jun 18.
Published in final edited form as: Biochemistry. 2006 Oct 24;45(42):12654–12663. doi: 10.1021/bi061146z

Table 3.

Normal mode analysis of tACE and ACE2 - statistics for the mode having the highest overlap with the proposed structural transition for each structure studied.

Structure
analysed
Comparison
structure
Mode Overlap Collectivity |Amplitude| (DQa) RMSDb (Å)
ACE2o ACE2c 1 0.733 0.386 224 1.77
tACEo tACEc 1 0.709 0.427 248 1.86
tACEo wt tACE 1 0.643 0.427 245 2.19
ACE2c ACE2o 2 0.117 0.132 85 3.43
tACEc tACEo 6 0.133 0.500 96 3.62
wt tACE tACEo 2 0.129 0.468 107 3.89
a

The relative amplitude of perturbation along the direction of the normal mode concerned, required to achieve the best alignment with the comparison structure; arbitrary units.

b

R.m.s. deviation for all Cα-atoms between the comparison structure and a model perturbed according to the mode in question and the stated amplitude.