Table 3.

False negative (FN) vs. false positive (FP) rates on test and intergenic data sets for donor sites

FN(%)	FP(%)
	GS-test	GS-intg	GSESE-test	GSESE-intg
0.5	11.06	17.99	9.11	12.84
1	7.58	13.11	6.24	9.35
2	5.33	9.75	4.10	6.34
3	4.21	7.99	3.25	5.08
5	2.94	5.86	2.20	3.77
7	2.22	4.65	1.62	2.95
10	1.61	3.58	1.15	2.27
15	1.03	2.48	0.74	1.58
20	0.73	1.86	0.52	1.20

(b) Rates on test data are obtained from a 5-fold CV procedure on the ESEAra data set, while FP rates on intergenic data are averages of the FP rates obtained on INTAra by setting a threshold that would produce the same FN rate on each of the 5 fold test data.