TABLE 1.
Phaeoacremonium isolates used in this study
Phaeoacremonium species | No. of isolates | GenBank accession no.a | Origin | Yr of isolation |
---|---|---|---|---|
P. parasiticum | U31841 | CBS860.73b,c,d | 1973 | |
CBS113591e | ||||
2 (1)f | Plant nursery in Murcia, Spain | 2004 | ||
2 (1) | Plant nursery in Cataluña, Spain | 2005 | ||
1 (1) | Cataluña, Spain | 2005 | ||
P. rubrigenum | AF118139 | CBS498.94c | 1994 | |
P. inflatipes | AF197990 | CBS391.71c,d | 1966 | |
CBS166.75e | 1974 | |||
P. mortoniae | AF295328 | CBS211.97e | ||
CBS101585c,d | 1998 | |||
P. viticola | AF118137 | CBS113065e | 2001 | |
CBS101738c,d | 1993 | |||
1 (1) | Cataluña, Spain | 2005 | ||
P. angustius | AF197974g | |||
CBS114992c,d | 1992 | |||
CBS114991e | ||||
P. krajdenii | CBS109479d | 2001 | ||
P. venezuelense | CBS651.85d | 1974 | ||
P. scolyti | CBS113593d | |||
CBS113597e | 1999 | |||
P. aleophilum | AF017651 | CBS246.91c,d | 1996 | |
CBS110753e | 1998 | |||
1 | Toscana, Italy | |||
16 (1) | Ciudad Real, Spain | 2003 | ||
2 (2) | Ciudad Real, Spain | 2004 | ||
4 | Cataluña, Spain | 2005 | ||
2 | Plant nursery in Portugal | 2004 | ||
5 (1) | Plant nursery in Valencia, Spain | 2004 | ||
1 | Plant nursery in Murcia, Spain | 2004 | ||
2 | Plant nursery in Cataluña, Spain | 2005 |
GenBank accession numbers of the ITS sequences used to design the primers and the discriminant restriction enzyme digestion patterns.
CBS isolates are from the Centraalbureau voor Schimmelcultures, Baarn, The Netherlands.
Ex-type strains used to optimize PCR conditions.
Ex-type strains used to test PCR-RFLPs.
CBS isolates used to validate the identification by PCR-RFLP.
The numbers in parentheses are the numbers of field isolates identified by ITS sequences (and β-tubulin for P. viticola) used to validate the identification by PCR-RFLP.
ITS sequence of CBS isolate 249.95. This was the original holotype of P. angustius, which was replaced with CBS114992 when lethally contaminated.