TABLE 3.
wspF mutations from independent WS genotypes
WS genotypea | Nucleotide change | Nature of mutation | Amino acid change | Predicted effect on function and groupb |
---|---|---|---|---|
LSWS | A901C | Transition | S301R | Reduced activity (2); mutation close to active site |
WSA | T14G | Transversion | I5S | Reduced activity (2); mutation close to active site |
WSB | Δ620-674 | Deletion | P206Δ(8)c | No activity (3); C-terminal third of protein lost |
WSC | G823T | Transversion | G275C | Reduced activity (2); mutation close to active site |
WSE | G658T | Transversion | V220L | Reduced activity (2) |
WSF | C821T | Transversion | T274I | Reduced activity (2); mutation close to active site |
WSG | C556T | Transversion | H186Y | No activity (3); catalytic residue altered |
WSJ | Δ865-868 | Deletion | R288Δ(3)c | Reduced activity (2); most of protein remains |
WSL | G482A | Transition | G161D | Reduced activity (2) |
WSN | A901C | Transition | S301R | Reduced activity (2); same mutation as in LSWS |
WSO | Δ235-249 | Deletion | V79Δ(6)c | No activity (3); C-terminal two-thirds lost |
WSU | Δ823-824 | Deletion | T274Δ(13)c | No activity (3); Asp286 active site residue is lost |
WSW | Δ149 | Deletion | L49Δ(1)c | No activity (3); most of protein lost |
WSY | Δ166-180 | Deletion (in frame) | Δ(L51-I55) | Reduced activity (2); small in-frame deletion of five residues |
No wspF (wspC or wspR) mutation was detected in WSD, WSH, WSI, WSK, WSM, WSP, WSQ, WSR, WSS, WST, WSV, WSX, and WSZ.
Defects caused by each mutation were scored on the basis of the likely magnitude of the effect (see text): 1, wild-type wspF (13 isolates); 2, reduced activity (9 isolates); 3, no activity (5 isolates).
P206Δ(8) indicates a frameshift; the number of new residues before a stop codon is reached is in parentheses.