TABLE 1.
Number of SNPs as a function of minor allele count (i, columns) and alignment depth (n, rows) in 1257 Unigene clusters
|
i
|
||||||||
|---|---|---|---|---|---|---|---|---|
| n | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
| 2 | 265,245 | 4,512 | ||||||
| 3 | 85,559 | 1,874 | ||||||
| 4 | 49,382 | 1,081 | 233 | |||||
| 5 | 31,676 | 727 | 253 | |||||
| 6 | 16,795 | 394 | 114 | 47 | ||||
| 7 | 16,283 | 459 | 68 | 102 | ||||
| 8 | 10,483 | 278 | 69 | 58 | 30 | |||
| 9 | 8,152 | 199 | 46 | 31 | 41 | |||
| 10 | 7,017 | 205 | 21 | 26 | 20 | 14 | ||
| 11 | 5,709 | 137 | 26 | 11 | 33 | 19 | ||
| 12 | 4,905 | 152 | 24 | 15 | 16 | 16 | 4 | |
| 13 | 3,287 | 113 | 15 | 6 | 10 | 8 | 5 | |
| 14 | 2,959 | 124 | 7 | 6 | 7 | 9 | 2 | 1 |
| 15 | 24,386 | 794 | 127 | 71 | 58 | 68 | 32 | 30 |
The column corresponding to i = 0 tabulates monomorphic positions.