TABLE 2.

Characteristics of SNPs in soybean genic sequence

	Aligned sequence length (bp)	Single-base changes	Transitions	Transversions	Othersa	Indels	SNPs	SNP frequency (SNPs/kbp)	Nucleotide diversity (θ × 103)
Exon	1,520,855	2,718	1,559	1,159	3	390	3,108	2.04	0.895 ± 0.47
Intron	916,413	1,994	1,064	930	2	449	2,443	2.66	1.168 ± 0.62
Total	2,437,268	4,712	2,623	2,089	5	839	5,551	2.28	0.997 ± 0.53

^aTriallelic single-nucleotide changes.