TABLE 3.
Haplotype numbers in 2032 SNP-containing gene fragments
SNP haplotype no.
|
|||||||
---|---|---|---|---|---|---|---|
SNPs/fragment | Potential haplotypes | 2 | 3 | 4 | 5 | 6 | Total |
1 | 2 | 837 | 837 | ||||
2 | 4 | 336 | 171 | 1 | 508 | ||
3 | 6 | 153 | 92 | 16 | 261 | ||
4 | 6 | 68 | 69 | 14 | 151 | ||
5 | 6 | 36 | 30 | 12 | 2 | 80 | |
6 | 6 | 18 | 20 | 8 | 2 | 48 | |
7 | 6 | 15 | 15 | 5 | 3 | 1 | 39 |
8 | 6 | 9 | 14 | 3 | 1 | 27 | |
9 | 6 | 9 | 8 | 5 | 22 | ||
10 | 6 | 8 | 5 | 3 | 16 | ||
11 | 6 | 1 | 4 | 2 | 7 | ||
12 | 6 | 2 | 3 | 1 | 6 | ||
13 | 6 | 4 | 1 | 5 | |||
14 | 6 | 2 | 1 | 1 | 4 | ||
15 | 6 | 2 | 1 | 3 | |||
>15 | 6 | 6 | 10 | 1 | 1 | 18 | |
Total fragments | 1502 | 446 | 73 | 9 | 2 | 2032 | |
Total haplotypes | 3004 | 1338 | 292 | 45 | 12 | 4691 | |
Proportion with haplotype no. | 0.64 | 0.29 | 0.06 | 0.01 | 0.003 | ||
Mean haplotype no./fragment | 2.31 |