TABLE 4.
Existing linkage group lengths, number of SSRs, RFLPs, and other marker types including RAPD, AFLP, and classical and isozyme loci in the Song et al. (2004) consensus genetic linkage map and newly mapped genes
| Linkage group length and preexisting marker nos.
|
Newly mapped genes
|
|||||||
|---|---|---|---|---|---|---|---|---|
| Linkage group | Length (cM) | SSR | RFLP | Other marker types | Total markers | Observed | Predicted based on LG length | χ2 |
| A1 | 102.3 | 50 | 37 | 0 | 87 | 53 | 46 | 1.07 |
| A2 | 165.7 | 64 | 46 | 6 | 116 | 78 | 75 | 0.12 |
| B1 | 131.8 | 35 | 33 | 3 | 71 | 47 | 65 | 4.98 |
| B2 | 125.0 | 36 | 42 | 10 | 88 | 47 | 51 | 0.31 |
| C1 | 136.1 | 43 | 23 | 4 | 70 | 51 | 36 | 6.25 |
| C2 | 157.9 | 53 | 44 | 3 | 100 | 53 | 70 | 4.13 |
| D1a | 120.9 | 53 | 37 | 11 | 101 | 45 | 52 | 0.94 |
| D1b | 138.0 | 58 | 19 | 4 | 81 | 57 | 69 | 2.09 |
| D2 | 140.9 | 60 | 19 | 8 | 87 | 77 | 61 | 4.20 |
| E | 71.3 | 43 | 47 | 13 | 103 | 70 | 50 | 8.00* |
| F | 151.4 | 64 | 41 | 8 | 113 | 72 | 69 | 0.13 |
| G | 126.0 | 63 | 53 | 13 | 129 | 68 | 53 | 4.25 |
| H | 124.0 | 38 | 41 | 5 | 84 | 48 | 57 | 1.42 |
| I | 120.9 | 40 | 32 | 4 | 76 | 54 | 59 | 0.42 |
| J | 91.2 | 50 | 43 | 5 | 98 | 74 | 44 | 20.45* |
| K | 120.0 | 59 | 24 | 9 | 92 | 69 | 49 | 8.16* |
| L | 117.0 | 52 | 43 | 4 | 99 | 41 | 53 | 2.72 |
| M | 146.3 | 51 | 24 | 3 | 78 | 39 | 64 | 9.77* |
| N | 117.2 | 45 | 29 | 8 | 82 | 48 | 51 | 0.18 |
| O | 146.4 | 57 | 32 | 4 | 93 | 51 | 67 | 3.82 |
| Total | 2550.3 | 1014 | 709 | 125 | 1848 | 1141 | ||
Significant deviation (P ≤ 0.01) from the predicted number of genes based on linkage group length.