TABLE 4.
Epistatic QTL detected in the Ler × Col RILs
| Trait | IDa | Marker 1 | Position | Range | Marker 2 | Position | Range |
|---|---|---|---|---|---|---|---|
| Long day environment | |||||||
| Lateral branches | E1 | CATTS039 | I, 51.22 | 45.20–60.78 (MI62–BH.160L) | MI421 | II, 12.27 | 2.24–25.45 (MI320–THY_1) |
| E2 | MI390 | IV, 9.75 | 6.00–36.73 (G3843–PCITD23) | EMB514 | V, 110.74 | 104.35–110.74 (MI70–EMB514) | |
| E3 | M336 | II, 65.98 | 57.80–71.36 (VE017–MI79A) | M194 | V, 81.26 | NA | |
| E4 | G17311 | I, 131.83 | NA | RRS2 | II, 79.29 | NA | |
| E5 | AGP64 | I, 128 | 126.76–128 (VE011–AGP64) | MI138 | V, 33.14 | NA | |
| E6 | VE012 | II, 0 | NA | G4014 | III, 68.86 | NA | |
| E7 | PCITF3 | IV, 31.83 | NA | MI322 | V, 27.73 | NA | |
| E8 | M315 | II, 3.73 | NA | MI473 | II, 69.76 | 69.76–71.36 (MI473–MI79A) | |
| Lateral branch nodes | E1 | ATHFUS6 | III, 90.25 | 90.25–93.62 (ATHFUS6–NGA6) | MI174 | V, 23.96 | 0–27.73 (PATT80–MI322) |
| Short day environment | |||||||
| Lateral branches | E1 | NGA8 | IV, 25.31 | 13.06–33.64 (APP–M518) | H2A1 | V, 102.00 | 68.69–110.74 (M435–EMB514) |
| E2 | CDS7 | I, 51.22 | 14.65–51.22 (ATTS0477–CATTS039) | MI306 | IV, 22.11 | 22.11–50.88 (MI306–MI112) | |
| E3 | MI103 | I, 115.41 | NA | AG | IV, 55.18 | NA | |
| E4 | MI208 | I, 79.83 | NA | CA1 | III, 0 | NA | |
| Lateral branch nodes | E1 | M448A | IV, 21.59 | 2.75–36.73 (MI204–PCITD23) | H2A1 | V, 102.00 | 75.36–129.05 (G4028–CATHHAN) |
| E2 | MI139 | II, 28.11 | 28.11–29.38 (MI139–MI148) | M448A | IV, 21.59 | NA | |
| E3 | AGP64 | I, 128.00 | NA | G4028 | V, 75.36 | NA | |
a
IDs correspond to epistatic QTL in Figure 6.