TABLE 5.
Epistatic QTL detected in the Cvi × Ler RILs
| Trait | IDa | Marker 1 | Position | Range | Marker 2 | Position | Range |
|---|---|---|---|---|---|---|---|
| Long day environment | |||||||
| Lateral branches | E1 | AD.112L | III, 77.07 | 75.45–77.07 (AD.495L–AD.112L) | DF.231C | V, 26.53 | 20.19–31.80 (BH.107L–DF.184L) |
| E2 | EC.480C | I, 15.49 | NA | EG.75L | III, 7.25 | NA | |
| Lateral branch nodes | E1 | FD.167L | IV, 51.74 | 37.14–64.34 (CD.84C–GB.490C) | DF.231C | V, 26.53 | 15.39–49.32 (BH.325L–HH.480C) |
| E2 | CH.200C | I, 76.01 | 76.01–79.20 (CH.200C–DF.260L) | HH.158L | III, 26.55 | 22.45–26.89 (GH.390L–EC.83C) | |
| E3 | AXR1 | I, 7.70 | NA | HH.90L | III, 80.81 | NA | |
| E4 | GB.500C | I, 65.22 | NA | BH.92L | IV, 29.36 | NA | |
| Short day environment | |||||||
| Lateral branches | E1 | EG.129C | I, 57.56 | 49.42–60.96 (GB.112L–BH.162C) | AD.92L | III, 32.31 | 29.46–32.31 (GD.318C–AD.92L) |
| E2 | PVV4 | I, 0 | 0–7.70 (PVV4–AXR1) | HH.480C | V, 49.32 | 42.14–49.32 (GH.121L–HH.480C) | |
| E3 | PVV4 | I, 0 | NA | CC.318C | I, 108.57 | NA | |
| Lateral branch nodes | E1 | AD.121C | I, 39.46 | 39.46–40.44 (AD.121C–AD.106L) | FD.345C | V, 93.14 | 90.49–109.90 (CC.262C–GD.222C) |
| E2 | HH.159C | IV, 60.64 | 56.94–64.34 (CH.70L–GB.490C) | DF.231C | V, 26.53 | 24.55–42.14 (AD.114C–42.14) | |
| E3 | CH.200C | I, 76.01 | NA | BH.96L | V, 55.96 | NA | |
| E4 | DF.73L | I, 29.04 | NA | EC.83C | III, 26.89 | NA |
a
IDs correspond to epistatic QTL in Figure 6.