Table 1.
List of the up-regulated genes in stage X embryo from microarray data
| # | GeneChip Probe Set ID | Gene Title | GO Molecular Function Descriptiona | log2 FCb |
| 1 | Gga.11040.1.S1_at | similar to hypothetical protein BC009518 | NA | 1.208 |
| 2 | Gga.12503.2.S1_at | Nucleoredoxin | electron carrier activity | 1.874 |
| 3 | Gga.13029.1.S1_at | Finished cDNA, clone ChEST43l14 | NA | 1.561 |
| 4 | Gga.14754.1.S1_at | death associated transcription factor 1 | cation binding, metal ion binding | 1.514 |
| 5 | Gga.16489.1.S1_at | Finished cDNA, clone ChEST769a21 | NA | 1.111 |
| 6 | Gga.17114.2.S1_a_at | Finished cDNA, clone ChEST485a9 | NA | 1.675 |
| 7 | Gga.8833.1.S1_at | Transcribed locus | NA | 2.036 |
| 8 | GgaAffx.10043.1.S1_at | similar to Topoisomerase I binding, arginine/serine-rich | Catalytic activity | 1.498 |
| 9 | GgaAffx.11175.1.S1_at | similar to 12-transmembrane domain co-transporter Ce11 | Catalytic activity | 1.561 |
| 10 | GgaAffx.11653.1.S1_s_at | serine/threonine kinase 17b (apoptosis-inducing) | purine nucleotide binding, transferase activity, transferring phosphorus-containing groups | 1.795 |
| 11 | GgaAffx.21832.1.S1_s_at | fibroblast growth factor 13 | Growth factor activity | 1.822 |
| 12 | GgaAffx.2367.1.S1_at | NA | NA | 1.775 |
| 13 | GgaAffx.4101.1.S1_at | similar to transmembrane protein 20 | NA | 1.600 |
| 14 | GgaAffx.4973.2.S1_s_at | similar to TNF receptor-associated factor 6 | protein binding/zinc ion binding | 2.174 |
| 15 | GgaAffx.5963.1.S1_at | similar to RIKEN cDNA C030048B08 | nucleotide binding | 1.072 |
| 16 | GgaAffx.8887.1.S1_s_at | similar to VANIN 3 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 2.237 |
| 17 | GgaAffx.9105.1.S1_at | similar to Stromal interaction molecule 2 precursor | catalytic activity/scavenger receptor activity | 1.649 |
| 18 | GgaAffx.9296.3.S1_s_at | similar to RNA polymerase II elongation factor ELL2 | catalytic activity | 1.404 |
| 19 | Gga.17330.1.S1_at | splicing factor, arginine/serine-rich 15 | nucleotide binding/nucleic acid binding | 2.583 |
| 20 | Gga.318.1.S1_at | potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 | alpha-type channel activity, calmodulin binding, cation transporter activity, ion channel activity | 2.368 |
| 21 | Gga.4401.1.S1_a_at | prostaglandin-endoperoxide synthase 2 | cation binding, dioxygenase activity, metal ion binding, oxidoreductase activity, acting on peroxide as acceptor | 3.314 |
| 22 | GgaAffx.20623.1.S1_s_at | LOC420789 | NA | 2.979 |
| 23 | GgaAffx.7728.1.S1_at | similar to velo1 | NA | 2.594 |
| 24 | GgaAffx.10088.2.A1_at | similar to hypothetical protein MGC46520 | serine-type endopeptidase activity | 0.199 |
| 25 | Gga.9919.1.S1_at | similar to pre-mRNA splicing factor SF3b 155 kDa subunit | Catalytic activity | 0.458 |
| 26 | Gga.550.1.S1_at | gamma-aminobutyric acid (GABA) A receptor, alpha 6 | alpha-type channel activity, ion channel activity, neurotransmitter receptor activity, transmembrane receptor activity | 0.513 |
| 27 | GgaAffx.6386.1.S1_at | similar to Ubiquitin ligase protein RNF8 | protein binding/zinc ion binding | 0.835 |
aGene transcripts were classified using NetAffx analysis tool provided by the Affymetrix.
bLog2 fold changes calculated from the microarray data (right column) are indicated. Log2FC > 1 indicates that gene expression at stage X was up-regulated more than twice than that at HH stage 3. NA is not annotated from NetAffx analysis tool.