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. 2007 Jun 11;8:158. doi: 10.1186/1471-2164-8-158

Table 2.

Genes repressed by at least 2 treatments.

DSM code Predicted protein
Protein Fate Tun 1 h Tun 2 h DTT tPA

Proteolytic Degradation
An12g05960 similar to dipeptidyl peptidase II DPPII Rattus norvegicus *1.3 ± 0.5 *1.6 ± 0.2 -1.9 ± 0.3 -1.5 ± 0.6
An03g01660 similar to vacuolar aminopeptidase Y APE3 -2.1 ± 0.3 *1.0 ± 0.05 -1.7 ± 0.7 *1.1 ± 0.02
An03g05200 similar to carboxypeptidase S1 Penicillium janthinellum -2.1 ± 0.4 *1.1 ± 0.4 -1.8 ± 0.6 *-1.4 ± 0.08
An04g01440 similar to vacuolar aspartyl protease PEP4 -2.1 ± 0.3 *1.1 ± 0.2 -1.6 ± 0.04 *-1.3 ± 0.03
An08g08750 carboxypeptidase Y CPY -1.9 ± 0.2 *1.0 ± 0.06 -2.2 ± 0.02 *-1.3 ± 0.04
An14g00620 similar to aminopeptidase Aspergillus oryzae -2.4 ± 0.5 *-1.0 ± 0.01 -2.3 ± 0.1 *-1.1 ± 0.2
Lipid metabolism

An16g01880 similar to lysophospholipase Aspaergillus foetidus *-2.2 ± 0.5 -1.7 ± 0.3 -99.8 ± 5.6 1.4 ± 0.8
An02g09540 similar to choline permease HNM1 *1.1 ± 0.5 *1.0 ± 0.6 -2.4 ± 0.9 -1.9 ± 0.1
An16g06090 similar to choline permease HNM1 *-1.3 ± 0.3 *1.1 ± 0.01 -1.9 ± 0.2 -2.2 ± 0.5
An15g06810 similar to cytochrome-b5 reductase MCR1 *1.1 ± 0.2 *1.6 ± 0.1 -1.7 ± 0.3 -2.6 ± 011
An01g03350 similar to C-8 sterol isomerase ERG1 Neurospora crassa -1.9 ± 0.3 *1.2 ± 0.2 -2.1 ± 0.6 *-1.2 ± 0.3
An02g03580 similar to lipid metabolism protein ERG28 -1.8 ± 0.2 *1.2 ± 0.02 -2.0 ± 0.2 *-1.3 ± 0.06
An01g07000 similar to C-14 sterol reductase ERG24 -1.7 ± 0.1 *1.2 ± 0.2 *3.9 ± 0.4 -1.9 ± 0.08
Cell wall

An16g03370 similar to protein involved in of cell wall biogenesis CWH43 -2.0 ± 0.2 *1.2 ± 0.1 -2.4 ± 0.1 *-1.2 ± 0.01
An16g07040 similar to cell wall glucanase SCW10 -1.7 ± 0.1 *-1.1 ± 0.07 -4.0 ± 0.5 *-1.0 ± 0.04
Amino acid metabolism

An04g00990 NADP-dependent glutamate dehydrogenase GDHA *1.1 ± 0.3 *-3.5 ± 2.0 -3.6 ± 0.7 -1.5 ± 0.005
An16g01610 similar to hydroxylase BBH Rattus norvegicus *-1.2 ± 0.5 -2.5 ± 0.7 -13.5 ± 0.1 *-1.0 ± 0.5
An01g14730 similar to lactonizing enzyme I TcMLE Trichosporon cutaneum -1.6 ± 0.1 *-1.3 ± 0.1 -1.5 ± 0.2 *1.3 ± 0.2
An02g00190 similar to enantiomer-selective amidase AMDA Rhodococcus sp. -2.9 ± 0.5 *1.1 ± 0.2 -2.3 ± 0.3 *-1.3 ± 0.5
An12g10000 similar to GABA permease GABA Aspergillus nidulans *-1.0 ± 0.08 *1.0 ± 0.1 -5.5 ± 1.9 -1.8 ± 0.09
Phosphate Metabolism

An12g01910 similar to phytase PHYA3 Aspergillus fumigatus -1.5 ± 0.1 -1.6 ± 0.3 -21.1 ± 2.5 *-1.0 ± 0.1
C-compound and carbohydrate metabolism

An09g00270 alpha-galactosidase AGLC *-1.2 ± 0.1 -2.0 ± 0.5 -5.9 ± 2.0 *1.1 ± 0.3
An09g00260 alpha-galactosidase AGLC *-2.6 ± 0.5 -2.1 ± 0.3 -6.0 ± 4.3 *1.1 ± 0.2
An01g01540 similar to alpha.alpha-trehalase TREA A. nidulans -3.0 ± 0.6 *-1.1 ± 0.1 -2.7 ± 0.6 *1.2 ± 0.02
An01g00780 endo-1.4-xylanase XYNB -3.4 ± 0.6 *1.5 ± 0.4 -4.3 ± 0.9 *1.0 ± 0.1
An05g00930 similar to mitochondrial malic enzyme MAE1 -2.1 ± 0.2 *1.2 ± 0.1 -4.0 ± 1.0 *-1.0 ± 0.04
An19g00090 similar to exo-beta-1.3-glucanase CMG1 Coniothyrium minitans -2.6 ± 0.3 *1.6 ± 0.1 -4.6 ± 1.0 *3.7 ± 0.06
An11g04780 similar to protein involved in active glycerol uptake GUP1 -1.7 ± 0.2 *1.2 ± 0.2 -2.4 ± 0.3 *1.0 ± 0.1
metabolism of vitamins. cofactors. and prosthetic groups

An01g04250 similar to uroporphyrinogen decarboxylase HEM12 *-1.2 ± 0.06 *1.1 ± 0.04 -1.6 ± 0.1 -1.6 ± 0.1
Cellular transport

An12g10320 similar to high-affinity zinc transport protein ZRT1 *1.1 ± 0.05 *1.4 ± 0.04 -2.2 ± 0.04 -3.2 ± 1.1
An16g06740 similar to cadmium resistance protein YCF1 *-1.4 ± 0.2 *-1.7 ± 0.5 -1.7 ± 0.2 -1.7 ± 0.3
Cell Rescue. Defense and Virulence

An07g00570 similar to membrane protein PTH11 Magnaporthe grisea *-1.1 ± 0.1 *-1.0 ± 0.04 -2.7 ± 0.06 -2.0 ± 0.1
An18g00980 similar to membrane protein PTH11 M. grisea *-3.0 ± 0.5 *1.4 ± 0.2 -4.6 ± 0.2 -2.0 ± 0.1
An16g05920 similar to membrane protein PTH11 M. grisea *1.1 ± 0.2 -3.9 ± 1.1 -5.5 ± 1.1 *1.0 ± 0.08
Nucleotide/nitrogen and sulfur metabolism

An10g00800 similar to purine nucleoside permease NUP Candida albicans -5.4 ± 0.8 *-1.5 ± 0.07 -31.9 ± 2.7 *1.2 ± 0.1
An18g01220 similar to allantoate permease DAL5 -1.6 ± 0.1 *1.6 ± 0.2 -4.2 ± 0.06 *-1.2 ± 0.05
Other

An07g06530 similar to multicopy suppressor SUR7 *2.0 ± 0.4 *1.7 ± 0.2 -5.0 ± 1.9 -1.6 ± 0.1
An16g05910 similar to putative cytochrome P450 A. fumigatus *-1.2 ± 0.08 -2.3 ± 0.5 -5.8 ± 0.2 *2.2 ± 0.05
An11g09870 similar to palmitoleyltransferase ERF2 -1.6 ± 0.1 *1.4 ± 0.2 -2.1 ± 0.3 *1.0 ± 0.01
Unclassified

An02g03570 similar to membrane protein YBR159w -2.1 ± 0.2 *-1.3 ± 0.3 *-1.9 ± 1.0 -1.6 ± 0.2
An11g07340 similar to hypothetical O-methyl transferase ENCK *1.3 ± 0.1 *1.3 ± 0.5 -4.2 ± 0.6 -4.2 ± 1.7
An12g09640 similar to hypothetical GTP cyclohydrolase *2.6 ± 0.5 *1.3 ± 0.4 -3.3 ± 0.2 -1.9 ± 0.5
An01g09220 weakly similar to tyrosinase MELC2 *-2.1 ± 0.5 *2.1 ± 0.2 -5.2 ± 1.7 -1.8 ± 0.4
An03g00770 similar to allergic allergen rAsp f 4 A. fumigatus *-2.3 ± 0.6 *-1.1 ± 0.3 -2.6 ± 0.1 -2.8 ± 0.6
An08g03760 hypothetical protein *-1.1 ± 0.1 *-1.3 ± 0.07 -4.0 ± 1.8 -2.4 ± 0.3
An02g08330 hypothetical protein *1.2 ± 0.2 *-17 ± 11.3 13.5 ± 5.2 -1.8 ± 0.1
An06g01000 hypothetical protein *-1.1 ± 0.1 *-1.0 ± 0.05 -1.83 ± 0.5 -2.3 ± 0.1
An11g07020 hypothetical protein *1.3 ± 0.3 *1.2 ± 0.02 -2.1 ± 0.3 -1.8 ± 0.2
An02g08300 hypothetical protein *2.2 ± 0.5 *-1.7 ± 0.3 -3.2 ± 0.8 -8.6 ± 0.9
An03g00840 hypothetical protein 1.8 ± 0.2 *-1.2 ± 0.2 *1.3 ± 0.1 -2.4 ± 0.9
An18g01000 hypothetical protein *-2.4 ± 0.5 *1.1 ± 0.1 -4.6 ± 0.5 -1.8 ± 0.2
An13g01520 hypothetical protein -1.5 ± 0.1 *-2.9 ± 0.2 *-1.0 ± 0.4 -1.9 ± 0.2
An02g00120 hypothetical protein -2.4 ± 0.5 *1.2 ± 0.3 -2.0 ± 0.5 *-1.8 ± 0.07
An04g01690 hypothetical protein -2.1 ± 0.4 *-1.0 ± 0.3 -3.1 ± 1.1 *-1.1 ± 0.03
An05g01770 hypothetical protein -1.5 ± 0.1 *-1.5 ± 0.3 -5.8 ± 1.0 *1.0 ± 0.5
An07g05160 hypothetical protein -1.7 ± 0.1 *-1.2 ± 0.2 -2.1 ± 0.05 *1.0 ± 0.08
An07g08400 strong similarity to allergen rAsp f 4 A. fumigatus -1.8 ± 0.2 *1.3 ± 0.2 -4.2 ± 1.2 *1.1 ± 0.07
An08g08600 similar to RTN2 -1.9 ± 0.2 *-1.0 ± 0.01 -3.3 ± 0.6 *-1.0 ± 0.1
An12g10590 hypothetical protein -2.6 ± 0.4 *1.1 ± 0.03 -12.0 ± 2.1 *1.0 ± 0.02
An15g01740 similar to ER protein of unknown function -1.6 ± 0.1 *1.4 ± 0.1 -2.1 ± 0.3 *1.0 ± 0.1

The fold changes in expression are indicated for all the treatments (Tun = tunicamycin, DTT = dithiothreitol, tPA = production of t-PA) and are averaged over two experiments. Similarities are expressed in comparison with the Saccharomyces cerevisiae genome except when indicated. The symbol* indicates that the value does not meet one of the 3 restrictive criteria defined in the Method section.