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. 2005 Jul 14;106(9):3271–3284. doi: 10.1182/blood-2005-01-0150

Table 3.

Mutational spectra of mtDNA control region in single CD34+ cells, T cells, B cells, and granulocytes

Heterogeneity
Donor no. (age, y/sex) and mtDNA sequence differences from aggregate sequence
Cell no.
Frequency
Unique
No. % No. %
1 (48/F)
   CD34+ cells
      Aggregate sequence 53
      Nonaggregate sequence 32 37.6 13 15.3
         +8CT6C,* 9CT6C* 20
         +71G > G/del,§ 8CT6C,* 9CT6C* 1
         +204T > C 1
         +7CT6C,* 8CT6C,* 16192C > T/C 1
         +8CT6C,* 9CT6C,* 16207A > G/A 1
         +8CT6C,* 9CT6C,* 16355C > C/T 1
         +8CT6C* 9CT6C,* 10CT6C* 1
         +8CT6C,* 9CT6C,* 10CT6C,* 16129G > G/A 1
         +551A > G§ 1
         +556A > G§ 1
         +16129G > A/G 1
         +16192C > T/C 1
         +16482A > A/G, 16525A > G§ 1
   T cells
      Aggregate sequence 53
      Nonaggregate sequence 34 39.1 20 23
         +8CT6C,* 9CT6C* 14
         +8CT6C,* 9CT6C,* 10CT6C* 2
         +57T > T/C,§ 8CT6C,* 9CT6C* 1
         +71G > del,§ 8CT6C,* 9CT6C,* 16132A > A/G§ 1
         +143G > G/A, 16278C > C/T 1
         +162C > C/T,§ 16381T > T/C 1
         +246T > T/C 1
         +7CT6C,* 8CT6C,* 16390G > A 1
         +8CT6C,* 9CT6C,* 16149A > A/G§ 1
         +8CT6C,* 9CT6C,* 16192C 1
         +9CT6C,* 10CT6C* 1
         +9CT6C,* 10CT6C,* 16184C > T 1
         +9CT6C,* 10CT6C,* 11CT6C* 1
         +526G > G/A§ 1
         +16210A > A/G§ 1
         +16222C > T 1
         +16222C > C/T 1
         +16267C > C/T§ 1
         +16277A > A/G§ 1
         +16390G > G/A 1
   B cells
      Aggregate sequence 69
      Nonaggregate sequence 17 19.8 11 12.8
         +8CT6C,* 9CT6C* 6
         +7CT6C,* 8CT6C* 2
         +7CT6C* 1
         +189A > G 1
         +204T > C 1
         +7CT6C,* 16262C > C/T 1
         +16112C > C/A§ 1
         +16147C > T 1
         +16148C > C/T 1
         +16189T > C, 16190C > C/T 1
         +16390G > A 1
   Granulocytes
      Aggregate sequence 27
      Nonaggregate sequence 37 57.8 27 42.2
         +8CT6C,* 9CT6C* 8
         +7CT6C,* 8CT6C* 4
         +37A > G/A§ 1
         +61C > A/C§ 1
         +72T > T/C 1
         +96C > T/C,§ 8CT6C,* 9CT6C* 1
         +141C > C/T§ 1
         +168T > T/C§ 1
         +168T > T/C,§ 217T > T/C 1
         +181A > A/G§ 1
         +192T > T/C, 8CT6C,* 9CT6C,* 16203A > A/G 1
         +204T > T/C, 16111C > G/C§ 1
         +221G > A/G§ 1
         +265T > T/C, 16213G > A, 16363C > C/T§ 1
         +7CT6C,* 16445T > T/C§ 1
         +7CT6C,* 8CT6C,* 16227A > A/G 1
         +8CT6C,* 9CT6C,* 16371A > A/G§ 1
         +316G > G/A 1
         +514-515delCA 1
         +16036G > G/del§ 1
         +16064T > T/C§ 1
         +16066A > A/G 1
         +16086T > C 1
         +16106G > G/C§ 1
         +16120A > A/G§ 1
         +16344C > T 1
         +16468T > T/C§ 1
2 (44/M)
   CD34+ cells
      Aggregate sequence 60
      Nonaggregate sequence 32 34.8 15 16.3
         +8CT6C,* 9CT6C,* 10CT6C* 12
         +9CT6C,* 10CT6C* 5
         +8CT6C* 3
         +64C > C/T 1
         +228G > A/G 1
         +236T > T/C 1
         +9CT6C,* 10CT6C,* 11CT6C* 1
         +385A > G 1
         +468C > C/A 1
         +16140T > T/C, 16411C > C/T§ 1
         +16269A > A/G 1
         +16273G > G/A, 16544T > C§ 1
         +16311T > T/C 1
         +16321C > C/T 1
         +16431C > C/T§ 1
   T cells
      Aggregate sequence 77
      Nonaggregate sequence 17 18.1 6 6.4
         +8CT6C,* 9CT6C,* 10CT6C* 10
         +8CT6C* 3
         +204T > C/T 1
         +9CT6C,* 10CT6C,* 11CT6C* 1
         +487A > A/G§ 1
         +16399A > A/G 1
   B cells
      Aggregate sequence 48
      Nonaggregate sequence 30 38.5 14 17.9
         +8CT6C,* 9CT6C,* 10CT6C* 13
         +8CT6C* 5
         +8CT6C,* 9CT6C,* 10CT6C,* 16093T > C 1
         +9CT6C,* 10CT6C* 1
         +368A > G§ 1
         +465C > C/T§ 1
         +16131T > T/C 1
         +16170A > A/G 1
         +16183A > G 1
         +16183A > A/del 1
         +16191C > C/T 1
         +16353C > C/T 1
         +16399A > G 1
         +16423A > A/G§ 1
   Granulocytes
      Aggregate sequence 44
      Nonaggregate sequence 38 46.3 26 31.7
         +9CT6C,* 10CT6C* 7
         +8CT6C* 4
         +8CT6C,* 9CT6C,* 10CT6C* 3
         +122C > C/T§ 2
         +49A > A/G,§ 8CT6C,* 16443T > T/C§ 1
         +108A > G/A, 16335A > T/A§ 1
         +119T > T/C, 16193C > C/T 1
         +204T>C, 16513T > T/C§ 1
         +263A > G/A, 8CT6C,* 9CT6C,* 10CT6C,* 402A > G/A§ 1
         +8CT6C,* 9CT6C,* 10CT6C,* 16454C > C/T§ 1
         +9CT6C,* 10CT6C,* 16338A > A/G§ 1
         +421T > T/C,§ 493A > A/G 1
         +470A > A/G§ 1
         +523A > G/A,§ 16494C > T/C§ 1
         +16026C > T§ 1
         +16081A > A/G 1
         +16095C > T§ 1
         +16143T > T/C,§ 16450G > G/A§ 1
         +16184C > C/A 1
         +16196G > G/A 1
         +16285A > A/G§ 1
         +16293A > A/G 1
         +16343A > A/G 1
         +16356T > T/C 1
         +16454C > C/T§ 1
         +16507C > C/A§ 1
3 (36/M)
   CD34+ cells
      Aggregate sequence 59
      Nonaggregate sequence 34 36.6 11 11.8
         +8CT6C,* 9CT6C* 19
         +16093T > C/T 4
         +7CT6C,* 8CT6C* 2
         +30T > T/G§ 1
         +7CT6C,* 8CT6C,* 9CT6C* 1
         +8CT6C,* 9CT6C,* 10CT6C* 1
         +8CT6C,* 9CT6C,* 16093T > C/T 1
         +16063T > T/C 1
         +16093T > T/C 1
         +16259C > C/T 1
         +16305A > A/G 1
         +16309A > A/G 1
   T cells
      Aggregate sequence 41
      Nonaggregate sequence 45 52.3 18 20.9
         +8CT6C,* 9CT6C* 23
         +8CT6C,* 9CT6C,* 10CT6C* 3
         +9CT6C,* 10CT6C* 3
         +9CT6C,* 10CT6C,* 11CT6C* 2
         +96C > C/T,§ 155T > T/C§ 1
         +118G > G/A,§ 8CT6C,* 9CT6C,* 10CT6C,* 16224C > T/C 1
         +143G > G/A, 8CT6C,* 9CT6C,* 16093T 1
         +150C > C/T, 8CT6C,* 9CT6C,* 16093T 1
         +309C > C/T, 8CT6C,* 9CT6C* 1
         +8CT6C,* 9CT6C,* 10CT6C* 1
         +8CT6C,* 9CT6C,* 16442C > C/T§ 1
         +9CT6C,* 10CT6C,* 11CT6C,* 12CT6C* 1
         +399T > T/C,§ 16200A > A/G§, 16307A > A/G§ 1
         +529G > A/G§ 1
         +16093T > T/C, 16293A > G/A 1
         +16292C > C/T 1
         +16401C > C/T§ 1
         +16410C > C/T§ 1
   B cells
      Aggregate sequence 48
      Nonaggregate sequence 46 48.9 17 18.1
         +8CT6C,* 9CT6C* 29
         +8CT6C,* 9CT6C,* 10CT6C* 2
         +18C > C/T§ 1
         +103G > A 1
         +103G > G/A, 8CT6C,* 9CT6C,* 16390G > A/G 1
         +200A > A/G 1
         +283A > A/G§ 1
         +7CT6C,* 16261C > T 1
         +7CT6C,* 8CT6C* 1
         +7CT6C,* 8CT6C,* 9CT6C* 1
         +8CT6C,* 9CT6C,* 16222C > C/T 1
         +8CT6C,* 9CT6C,* 10CT6C,* 16456G > G/A 1
         +16092T > T/C 1
         +16093T > T/C 1
         +16390G > A 1
         +16400C > C/T 1
         +16423A > A/G§ 1
   Granulocytes
      Aggregate sequence 42
      Nonaggregate sequence 30 41.7 25 34.7
         +8CT6C,* 9CT6C* 6
         +116A > A/G§ 1
         +127T > T/C, 16357T > T/A§ 1
         +162C > C/T§ 1
         +181A > A/G§ 1
         +7CT6C,* 8CT6C* 1
         +8CT6C,* 9CT6C,* 16561A > A/G§ 1
         +318T > T/C 1
         +437C > T/C,§ 16197C > C/T§ 1
         +502C > T/C 1
         +533A > G§ 1
         +570C > C/T§ 1
         +16064T > T/C,§ 16445T > T/C§ 1
         +16075T > T/G§ 1
         +16109A > A/C§ 1
         +16129G > A/G 1
         +16132A > A/G§ 1
         +16149A > A/G§ 1
         +16339C > T/C§ 1
         +16350A > A/G 1
         +16357T > T/C 1
         +16365C > C/T 1
         +16396T > T/C§ 1
         +16411C > C/T§ 1
         +16457G > G/A§ 1
4 (55/M)
   CD34+ cells
      Aggregate sequence 52
      Nonaggregate sequence 41 44.1 11 11.8
         +264C > T 12
         +514insCA 10
         +7CT6C,* 8CT6C* 5
         +264C > T/C 2
         +514insCA, 514-515delCA 2
         +43C > C/T,§ 264C > T 1
         +146T > C/T 1
         +146T > C/T, 514insCA 1
         +146T > T/C, 514insCA 1
         +150C > T/C, 514insCA, 514-515delCA 1
         +264C > C/T 1
         +264C > T, 16327C > C/T 1
         +7CT6C,* 8CT6C,* 514insCA 1
         +514insCA, 514-515delCA, 16287C > C/T 1
         +16156G > G/A§ 1
   T cells
      Aggregate sequence 50
      Nonaggregate sequence 43 46.2 25 26.9
         +514insCA 13
         +264C > T 5
         +3T > T/C,§ 264C > C/T, 16518G > G/A§ 1
         +146T > C, 514insCA 1
         +178A > A/G§ 1
         +204T > C 1
         +214A > G 1
         +217T > T/C, 6CT6C,* 7CT6C* 1
         +264C > C/T 1
         +264C > T 401T > T/C,§ 425A > A/G§ 1
         +6CT6C,* 7CT6C* 1
         +7CT6C,* 8CT6C* 1
         +514insCA, 514-515delCA 1
         +514-515delCA, 514insCA, 16200A > A/G§ 1
         +514insCA, 16292C > T 1
         +514insCA, 16206A > A/G,§ 16452T > T/C§ 1
         +514insCA, 16569G > G/A§ 1
         +526G > G/A§ 1
         +16155A > A/G 1
         +16174C > C/T 1
         +16206A > A/G,§ 16328C > C/T 1
         +16292C > C/T 1
         +16296C 1
         +16299A > A/G 1
         +16385A > A/G§ 1
         +16428G > G/A§ 1
         +16537C > C/T§ 1
   B cells
      Aggregate sequence 56
      Nonaggregate sequence 37 39.8 14 15.1
         +264C > T 14
         +514insCA 9
         +6C > C/T,§ 514insCA 1
         +146T > C, 514insCA 1
         +152T > C, 170C > C/T§ 1
         +169A > A/G§ 1
         +214A > G 1
         +237A > A/G, 264C > T 1
         +264C > T/C 1
         +264C > T, 7CT6C,* 8CT6C* 1
         +264C > T, 16338A > A/G§ 1
         +7CT6C* 8CT6C* 1
         +6CT6C,* 7CT6C,* 16338A > A/G§ 1
         +514insCA, 514-515delCA 1
         +514insCA, 7CT6C,* 8CT6C* 1
         +514insCA, 16382C > C/T§ 1
   Granulocytes
      Aggregate sequence 36
      Nonaggregate sequence 40 52.6 25 32.9
         +514insCA 11
         +264C > T 5
         +146T > C 1
         +146T > C, 514insCA 1
         +146T > T/C, 514insCA 1
         +146T > C, 514insCA, 16292C > C/T 1
         +174C > T,§ 514insCA 1
         +188A > A/G, 264C > C/T, 420C > C/T 1
         +210A > T/A§ 1
         +215A > G, 514insCA, 16434G > G/A§ 1
         +264C > T, 407T > T/C§ 1
         +264C > T, 16415A > A/G§ 1
         +294T > T/C, 514-515delCA, 514insCA 1
         +7CT6C,* 8CT6C* 1
         +7CT6C,* 8CT6C,* 514insCA 1
         +8CT6C* 1
         +368A > A/G,§ 523A > A/G§ 1
         +382C > T§ 1
         +514insCA, 514-515delCA, 16362T > T/C 1
         +536C > T/C§ 1
         +16096G > T,§ 16379C > C/T§ 1
         +16166A > A/del§ 1
         +16189T > T/del§ 1
         +16196G > G/A, 16224T > T/C 1
         +16199T > T/C,§ 16334T > T/C§ 1
         +16314A > A/G 1
5 (35/F)
   CD34+ cells
      Aggregate sequence 59
      Nonaggregate sequence 34 36.6 11 11.8
         +8CT6C,* 9CT6C* 19
         +7CT6C,* 8CT6C* 4
         +200A > A/G 2
         +146T > C/T 1
         +186C > C/T 1
         +200A > G 1
         +200A > A/G, 7CT6C,* 8CT6C,* 16362T > C/T 1
         +200A > G, 16326A > A/G 1
         +204T > C 1
         +220T > T/C§ 1
         +263A > G/A 1
         +385A > G 1
   T cells
      Aggregate sequence 71
      Nonaggregate sequence 25 26 15 15.6
         +8CT6C,* 9CT6C* 10
         +7CT6C,* 8CT6C,* 9CT6C* 2
         +14T > T/C§ 1
         +134T > T/C,§ 7CT6C,* 8CT6C* 1
         +200A > G 1
         +228G > A/G 1
         +7CT6C* 1
         +7CT6C,* 8CT6C,* 16140T > T/C 1
         +8CT6C,* 9CT6C,* 16092T > T/C 1
         +8CT6C,* 9CT6C,* 16212A > A/G 1
         +8CT6C,* 9CT6C,* 16360C > C/T 1
         +316G > G/A, 16111C > C/A§ 1
         +16225C > C/T§ 1
         +16230A > A/G 1
         +16463A > A/G 1
      B cells
      Aggregate sequence 61
      Nonaggregate sequence 30 33 17 18.7
         +8CT6C,* 9CT6C* 11
         +7CT6C,* 8CT6C* 3
         +146T > T/C 2
         +20T > T/C§ 1
         +105C > C/T,§ 8CT6C,* 9CT6C* 1
         +200A > A/G 1
         +204T > C, 8CT6C,* 9CT6C,* 16278C > C/T 1
         +8CT6C,* 9CT6C,* 16072C > C/G§ 1
         +8CT6C,* 9CT6C,* 10CT6C* 1
         +16151C > C/T§ 1
         +16166A > A/del§ 1
         +16213G > G/A 1
         +16254A > A/del§ 1
         +16275A > A/T§ 1
         +16292C > T/C§ 1
         +16310G > G/A 1
         +16340A > A/G§ 1
   Granulocytes
      Aggregate sequence 49
      Nonaggregate sequence 33 40.2 29 35.4
         +8CT6C,* 9CT6C* 2
         +7CT6C,* 8CT6C* 2
         +68G > G/A 1
         +71G > G/del§ 1
         +80C/T,§ 164C/T§ 1
         +82A > A/G,§ 200A > G 1
         +93A > A/G, 16185C > T 1
         +122C > T§ 1
         +139T > C/T§ 1
         +172T > T/O§ 1
         +199T > C, 16217T > T/C, 16439C > T§ 1
         +200A > G 1
         +200A > G/A 1
         +200A > A/G 1
         +200A > G, 223T > T/C 1
         +229G > C§ 1
         +266T > T/C 1
         +304C > C/T§ 1
         +310T > C/T 1
         +378C > C/T,§ 16189T > T/C 1
         +385A > A/del§ 1
         +457C > C/T§, 517A > G§ 1
         +16112C > C/T,§ 16420A > G/A§ 1
         +16113A > G§ 1
         +16123T > T/C§ 1
         +16285A > A/G§ 1
         +16305A > A/G 1
         +16325T > T/C 1
         +16350A > A/G 1
         +16426C > T§ 1
         +16527C > C/T§ 1

Frequency indicates total mtDNA heterogeneity different from aggregate sequences; unique, uniquely different heterogeneity; +, mtDNA nucleotide changes compared with aggregate cell sequence; and —, not applicable.

*

Homopolymeric C tract at nucleotide positions at 303 to 315 (eg, 7CT6C defined CCCCCCCTCCCCCC) in HV2

Same as the Revised Cambridge Reference Sequence but different from the aggregate sequence

Mixed pattern of 514-515delCA and 514insCA

§

mtDNA mutations (not listed in accepted polymorphism database)