TABLE 2.
DNA sequences and locations of primers used in this study
| Primer | Sequence | Locationa |
|---|---|---|
| Pr074 | 5′-ACAGAGAACGAGGGAAGTACC-3′ | 4156-4176 |
| Pr227 | 5′-GAGGGGGAAAAGTTTAATGAGAGC-3′ | 6161-6184 |
| Pr228 | 5′-GTTACCTGTTTACCATCTGCTGTAC-3′ | 5937-5961 |
| Pr231 | 5′-TTAGCAATGGCGGGAAAGAA-3′ | 4792-4811 |
| Pr245 | 5′-CTAGTCTAGACGAGGAAATGATTAGAGAAGGAA-3′ | 6912-6934 |
| Pr246 | 5′-CTAGTCTAGATGACAGGAATATCGTGCTTTTG-3′ | 6735-6756 |
| Pr254 | 5′-ATTGGCGCGCCGATATAATGGGAGATAAGACG-3′ | 42-62 |
| Pr255 | 5′-ATTGGCGCGCCGATATAATGGGAGATAAGACG-3′ | 989-1011 |
| Pr257 | 5′-CCTATGGCTGGCGTGACCAACTC-3′ | 12492-12514 |
| Pr311 | 5′-ATTGGCGCGCCACCGTTTGATTTTTAATGGATAATG-3′ | 773-796 |
| Pr312 | 5′-ATTGGCCGGCCCCTTTCCTTATGCTTTTGGAC-3′ | 2080-2100 |
| Pr313 | 5′-ATTGGCGCGCCGTTTATTTCCTTCTATATTTTTTC-3′ | 9241-9264 |
| Pr314 | 5′-ACCGGCCGGCCAACCTAATATAACTAGTTAATACTG-3′ | 11370-11394 |
| Pr722 | 5′-TGACAGATAGCAAGGGACGCAAGG-3′ | 8081-8104 |
| Pr723 | 5′-ATTGGCGCGCCCATCTCTCTCCCTTTCTACTA-3′ | 6944-6975 |
| Pr724 | 5′-ACCGGCCGGCCCTGTGAAAAATGTTGGGTATA-3′ | 6318-6349 |
| Pr725 | 5′-TGACAGATAGCAAGGGACGCAAGG-3′ | 4552-4575 |
| Pr726 | 5′-TTGGCGATATCAGGATGTAACAGT-3′ | 6563-6586 |
| Pr727 | 5′-ATTGGCGCGCCCATATTAGTATCCTTTCTTTTAT-3′ | 4880-4913 |
| Pr728 | 5′-ACCGGCCGGCCATACAAAATTCGATTTATATACAG-3′ | 4342-4376 |
| Pr729 | 5′-TTAGGTAGTACCATGAACCATTGT-3′ | 2742-2765 |
| Pr739 | 5′-CGATGGATCCATTGGTGTCAAAGCAGGCCAGTTA-3′ | 7617-7650 |
| Pr740 | 5′-CGATGAATTCTAGGATTTTTTATCATAAGCTAAT-3′ | 6282-6315 |
| Pr750 | 5′-CCGCGAATTCTTATCTCTTTATGCTTCCATT-3′ | 4356-4386 |
| Pr758 | 5′-ACGATCTGTCTTGATGTTTTCTAA-3′ | 3598-3621 |
| Pr669 | 5′-CCGCGCATGCCAGTTAAAATTTGATATTGCA-3′ | 5933-5949 |
| Pr670 | 5′-CCAACGAATTCGCTATATGAATGACTAGACCAAC-3′ | 7308-7330 |
| Pr781 | 5′-CGCGGATCCATGAACATTTTAGTTGCAGATGAC-3′ | 6934-6966 |
| Pr789 | 5′-CCGCCGAAGCTTCTAGAATTGCAAAACTTCTTA-3′ | 6238-6270 |
| Pr801 | 5′-TCATATCTTGTTTAGGACAGT-3′ | 4550-4570 |
| Pr802 | 5′-CTTTTTGATGCAAACATGTTT-3′ | 4271-4291 |
| Pr803 | 5′-AATACATGTGCGCCTCTAAGT-3′ | 5150-5170 |
| Pr804 | 5′-ACTAAAATAATCGCTAATACC-3′ | 4871-4891 |
| Pr835 | 5′-GCAGGCCAGTTAAAATTTGATATT-3′ | 7605-7628 |
| Pr836 | 5′-TTCCTCGTCATCTGCAACTAAAAT-3′ | 6928-6951 |
| Pr855 | 5′-TCGATTTATATACGGTTCATATTGAA-3′ | 4331-4356 |
| Pr856 | 5′-TTCAATATGAACCGTATATAAATCGA-3′ | 4331-4356 |
| Pr857 | 5′-CATAAAGAGATAAATACAAAATTCGA-3′ | 4353-4378 |
| Pr858 | 5′-TCGAATTTTGTATTTATCTCTTTATG-3′ | 4353-4378 |
| Pr859 | 5′-TGAAGTAATATAGTAAGGTTAAAGAA-3′ | 4309-4334 |
| Pr860 | 5′-TTCTTTAACCTTACTATATTACTTCA-3′ | 4309-4334 |
| Pr865 | 5′-TAGTTTTTTATTAAAGTTCATATAGGG-3′ | 4943-4969 |
| Pr866 | 5′-CCCTATATGAACTTTAATAAAAAACTA-3′ | 4943-4969 |
| Pr867 | 5′-TTAAGATTAGCTTGTAGACAGATTAGT-3′ | 4966-4992 |
| Pr868 | 5′-ACTAATCTGTCTACAAGCTAATCTTAA-3′ | 4966-4992 |
| Pr869 | 5′-AGGGTTAACATAAGTGTGTTATTCTTT-3′ | 4920-4946 |
| Pr870 | 5′-AAAGAATAACACACTTATGTTAACCCT-3′ | 4920-4946 |
| Pr990 | 5′-CAAGATCTCCCTATCCATCTCATGGTATTGGCATTAATG-3′ | 6799-6837 |
| Pr991 | 5′-CAATACCATGAGATGGATAGGGAGATCTTG-3′ | 6808-6837 |