TABLE 1.
Primer | Sequencea |
---|---|
dock-In | ITCDATIGCITCDATRTTNCCITCRTTRTTNACITCICC |
p41dir | GCNACNCCIACIGGIAARIGNITNAARGAYGTNCA |
p41d1 | CTAACAATTATAAGGTTCATGGA |
p41r1 | AAACTATTTTGTGAAGGTTCTAA |
p41d2 | ACTAATTCGACTGAACTTCAAA |
p41r2 | CACGTACATCCATCTCAGTTAT |
pGH9d1 | GACAACGGTAAGCTTCTTTGGGGAGAGG |
pGH9d2 | TTGAATACAAAAATGGCGTAGGTTCC |
pGH9r2 | ACTCTGCCGGCATTATCTGTGTACCC |
pGH9r3 | GATACTGCATCAAAGTCCGGCG |
pGH9d4 | CAGGCAGGTCGTGATGAAAGTTAC |
pGH9r4 | CTTACATCATCCCAGCAGTGCG |
pGH9d5 | TGCCGGAAGCGAAACATTTTG |
pGH9r5 | ATGTGTTTAAGAGTAGGACGTTG |
p90dir | GGNACIGAITAIAAITAIGCIAARITNITNCAITA |
p90d1 | GGCAGAATAAGAGTGTGCTTGACCC |
p90r1 | TCCAGGTGTATTGGTTATTTTCGCC |
p90d2 | TGTGTTTGTGACAACGGCGTTCTAG |
p90r2 | GATGACTCCAGTCATCAGTCGGATTCCA |
pMand1 | AACATACCCTTTCCCGTCAGACG |
pManr1 | TGTAAGATGCCATCCGTACCAAGG |
pMand2 | GCTGTACAGACTGCTATTCG |
pManr2 | CTGAAAAGTACTGGAACACCT |
p50dir | TNAAYAAYICNITNGGNITNACNCCICCIATGGG |
p50d1 | GGATGCAAAGACATTTGCTTCATGGG |
p50r1 | CAAGTTCCCATTGGAATCTCTTGCAGG |
p50d2 | GACCAGCGGAGGCAATATTGAGATTAG |
p50r2 | TATGAGCCCGTAAAACTGCCTTTGTCAG |
p50d5 | CGTATACTTGTTCCGGCTGGG |
p50r5 | GAGGCAATTGTACCCGCACC |
p50d12 | CACTAAGTCCGACCCGACAG |
p50r12 | GGTATGGCCTTGAATCAGGG |
p59d6 | GATCTGGCAAGCGGCTATTAC |
p59r6 | TGATAGAGATGTTATGCCATGCA |
p59d7 | ATGTGGATTTCGGCGATGG |
p59r7 | CCACATCCTCTCCGCCTTC |
In degenerate primers, I = inosine, Y = C or T, N = A, G, C, or T, R = A or G, and D = G, A, or T.