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. 2007 Jun 26;3:121. doi: 10.1038/msb4100155

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Copyright © 2007, EMBO and Nature Publishing Group

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits distribution, and reproduction in any medium, provided the original author and source are credited. This license does not permit commercial exploitation or the creation of derivative works without specific permission.

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Classification of the ORFs, reactions and metabolites included in iAF1260. (A) Coverage of characterized ORFs from each of the COGs functional classes included in iAF1260 and five previous reconstructions. The percentage given is the total coverage accounted for in iAF1260 for each class. Some ORFs included in the reconstructions did not have a COG functional class assignment (see Supplemental information). (B) The number of reactions (both gene-associated and non-gene associated) that are associated to ORFs from each COG functional class. Since ORFs can belong to multiple classes, the percent unique in each class is listed. Non-gene-associated reactions were assigned to a class manually. (C) The number of metabolites that participate in reactions from each functional class and the percent unique in each class. Other (OT) includes classes J, K, L, O, T, U, V (see Supplementary information). NC, no COG assignment.