. 2007 Apr 30;51(7):2514–2522. doi: 10.1128/AAC.00040-07

TABLE 1.

Primers used for SCCmec typing and real-time RT-PCR

Procedure and primer	Sequence
SCCmec typing
F3	TTGGGTTTCACTCGGATG
mA2	AACGTTGTAACCACCCCAAGA
F1	CACAATCTGTATTCTCAGGTCG
B3	ATTAGTGCTCGTCTCCACG
α2	AACCTATATCATCAATCAGTACGT
α3	TAAACGCATCAATGCACAAACACT
α4	AGCTCAAAAGCAAGCAATAGAAT
β2	ATTGCCTTGATAATAGCCTCT
mecA1	GGAGGATATTGATGAAAAAG
mecA2	GCTTCACTGTTTTGTTATTC
214	CGGATCCGAAATGGAATTAATATAATG
215	CGGAATTCGACTTGATTGTTTCCTC
BlaR1-501	TCAATCTCCAATAACTTTTTGG
BlaR1-1100	GGATCTTTCGTTATGTACAG
BLAI-11463	ACAATCGTATCTCCTGACCTCGCA
Real-time RT-PCR
16S	562F-TCCGGAATTATTGGGCGTAA
	682R-CCACTTTCCTCTTCTGCACTCA
	613T-TGAAAGCCCACGGCTCAACCG^a
BlaZ	647F-CCTGCTGCTTTCGGTAAGACTT
	783R-TCTTTTGGAACACCGTCTTTAATTAA
	682T-TTCTTGTTTTCTTTGCTTAATTTTCCATTTGCG^a
BlaR	232F-AACCATAACATAAATACCACCAAACCTAT
	342R-AACTAAAACTATCCAAATAACTGTGCAGAT
	264T-AATCCCAATTAAACTTATGGATATCTGTTGCGAACTCT^a
mecA	512F-GTTAGATTGGGATCATAGCGTCATT
	657R-TGCCTAATCTCATATGTGTTCCTGTAT
	538T-TTCCAGGAATGCAGAAAGACCAAAGCATGA^a
PBP2	165F-CGGTGCTGAAACTTATTCACAATATAAT
	249R-AGTGTATTGAGGTGTAAAGCCGTTAA
	196T-CCACACGTCTTTCGCTGCATTATCAGG^a
VraR	93F-GAATCCTCCTTATTTAAAGGTGCTTTC
	174R-TTGGTGCAACGTTCCATATTG
	121T-CCTCGATACGTGTACCTGAATCTGGCAATG^a
BlaI	265F-TAAACTGTATGGAGGGGATATGAAA
	356R-TGTCTCGCAATTCTTCAATTTCTT
	307T-GCGAAAAATGAAGAATTAAATAAC^a

Probe sequence.