TABLE 2.

Change in expression levels of mycobacterial genes with similar expression patterns in samples collected from mice relative to 7H9 broth

Gene	Product	Annotationa	Change (n-fold) ± SD at (days):
			28	45	60
rv0156	PntAB	Nicotinamide nucleotide transhydrogen subunit	2.72 ± 0.27	1.87 ± 0.22	1.57 ± 0.31
rv0348	Rv0348	Possible transcriptional regulator, TetR/AcrR family	1.59 ± 0.25	1.49 ± 0.11	1.67 ± 0.36
rv0981	MprA	Two-component response regulator	4.83 ± 2.25	2.26 ± 0.39	9.51 ± 5.17
rv1062	Rv1062	Unknown conserved protein	3.67 ± 0.2	2.77 ± 0.15	1.99 ± 0.31
rv2080	LppJ	Possible lipoprotein	3.43 ± 0.33	2.74 ± 0.22	2.13 ± 0.37
rv2326c	Rv2326c	Putative ABC transporter	3.36 ± 0.26	2.95 ± 0.19	2.67 ± 0.56
rv3079c	Rv3079c	Unknown conserved protein	−2.51 ± 0.57	−2.58 ± 0.6	−3.24 ± 1.19
rv3103c	Rv3103c	Proline-rich proteins of unknown function	−3.15 ± 0.96	−3.42 ± 0.96	−3.08 ± 0.8
rv3685c	Rv3685c	Probable cytochrome P-450	−2.3 ± 0.55	−2.17 ± 0.4	−2.98 ± 0.84
rv3799c	AccD4	Probable propionyl-coenzyme A carboxylase	−3.49 ± 0.49	−2.96 ± 0.4	−3.58 ± 1.07
rv3830c	Rv3830c	Transcriptional regulator protein	−1.87 ± 0.38	−1.92 ± 0.42	−1.74 ± 0.29
rv3871	Rv3871	Unknown conserved protein	−2.6 ± 0.48	−2.44 ± 0.58	−2.85 ± 0.71

^aTuberculist website (http://genolist.pasteur.fr/TubercuList/).