TABLE 1.
Prediction of Chlamydia MIPs (FKBP-type PPIases) as putative lipoproteins according to different bioinformatic tools
| Chlamydial species (strain[s]) | Gene (ordered locus name) | Primary accession no. (Swiss-Prot/TrEMBL) | Result by the following computer prediction program:
|
N-terminal amino acid sequencea | Predicted mass of prolipoprotein (kDa) | ||
|---|---|---|---|---|---|---|---|
| PROSITE | DOLOP | LipoP | |||||
| Chlamydia trachomatis (D/UW-3/Cx) | CT541 | P26623 | − | + | + | MKNILSWMLMFAVALPIVGC | 26.7 |
| Chlamydia muridarum (MoPn/Nigg) | TC0828 | Q9PJK1 | − | − | + | MKNILSWMLMFAVALPILGC | 26.8 |
| Chlamydophila caviae (GPIC) | CCA00078 | Q824R2 | + | + | + | MKKRWHLMIITMVVSFSIASC | 28.2 |
| Chlamydophila pneumoniae (AR39, CWL029, J138, TW-183) | CPn0661, CP0086, CpB0687 | Q9Z7P3 | + | + | + | MNRRWNLVLATVALALSVASC | 28.3 |
| “Ca. Protochlamydia amoebophila” (UWE25) | pc0383 | Q6ME92 | + | − | + | MFKQTKLLALASFGMFIGC | 31.7 |
a
Lipobox motifs are boldfaced.