TABLE 1.
Genes with enhanced expression in parental strain C. glutamicum RES167 compared with sigM mutant C. glutamicum DN1
Coding sequence | Gene | Predicted function | m valuea | a valueb |
---|---|---|---|---|
Disulfide stress-related genes | ||||
cg1765 | sufR | Transcriptional regulator of suf operon | 1.56 | 11.71 |
cg1764 | sufB | Fe-S cluster assembly protein | 1.33 | 15.20 |
cg1763 | sufD | Fe-S cluster assembly membrane protein | 1.18 | 14.71 |
cg1762 | sufC | Fe-S cluster assembly ATPase | 1.29 | 14.23 |
cg1761 | sufS | Fe-S cluster assembly protein | 1.16 | 13.86 |
cg1760 | sufU | Cysteine desulfhydrase | 1.08 | 13.47 |
cg1759 | Fe-S cluster assembly protein | 1.15 | 13.76 | |
cg3299 | trxB1 | Thioredoxin | 1.02 | 15.97 |
cg3422 | trxB | Thioredoxin reductase | 1.09 | 12.93 |
cg3423 | trxC | Thioredoxin | 1.28 | 12.56 |
cg3424 | cwlM | Cell wall hydrolase (autolysin) | 1.07 | 13.42 |
Heat stress-related genes | ||||
cg0690 | groES | Chaperone | 1.06 | 13.38 |
cg0691 | groEL | Chaperone | 1.04 | 12.04 |
cg3079 | clpB | Chaperone | 1.20 | 13.03 |
cg3078 | Hypothetical protein | 1.00 | 12.39 | |
cg3099 | grpE | Chaperone | 1.40 | 13.06 |
cg3098 | dnaJ | Chaperone | 1.35 | 14.22 |
cg3097 | hspR | Transcriptional regulator | 1.50 | 13.00 |
Genes with other functions | ||||
cg0840 | Hypothetical protein | 1.38 | 14.10 | |
cg0836 | Hypothetical protein | 1.16 | 11.59 | |
cg1091 | Hypothetical protein | 1.39 | 13.46 | |
cg1696 | Putative permease | 1.03 | 9.96 | |
cg3327 | dps | Starvation-induced DNA-protecting protein | 1.28 | 13.12 |
m value, log2 signal intensity ratio.
a value, signal intensity.