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. 2007 Jun 22;8:189. doi: 10.1186/1471-2164-8-189

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Copyright © 2007 Laha et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Distribution of Opisthorchis viverrini assembled ESTs (OvAEs) that contain predicted signal peptides or signal anchors. OvAEs that had BLAST hits greater than 1 × 10^-5were sorted into conserved (those matching entries for species other than platyhelminths), phylum Platyhelminthes-specific (only matching platyhelminth entries) and novel (no significant homology to any database entry). The sequences in each category were then analysed for the presence of a signal sequence using SignalP. The relative percentages of each category are indicated along with the sub-category of signal sequence positive contigs.