Skip to main content
. 2007 Jun;144(2):1079–1092. doi: 10.1104/pp.106.090241

Table III.

Genes selected for verification of statistical analysis using RT-PCR

TIGR LeGI gene ID and annotations were downloaded from the LeGI Web site. (AI63743 is a singleton and therefore retains its GenBank accession number.) ▴ indicates up-regulation of expression, and ▾ indicates repression of gene expression when REL, roots infected with egg-laying nematodes, are compared to uninfected tissue; s12–s36, susceptible roots infected 36 hpi compared to 12 hpi; and Resist, resistant roots compared to uninfected root tissue. Gene Group identifies category of genes identified in Table I: U = gene with unknown function; P = gene related to pathogen response. GC No. corresponds to clone DB number in GC library (Wilson et al., 1994).

TIGR Gene ID REL s12–s36 Resist Gene Group GC No. TIGR Annotation
TC166108 Glycogenin glucosyltransferase
TC166934 U Arabidopsis expressed protein
TC163802 Fibrillarin 2 (FIB2)
AI637343 U 361 Unknown
TC156238 P Homolog to UP|Q84XG6 (Q84XG6)
TC165974 U 197 Lycopersicon esculentum (DB197) Meloidogyne-induced GC protein
TC155133 12-Oxophytodienoic acid 10,11-reductase
TC161840 CBL-interacting protein kinase 23 (CIPK23)