Table 2.
pathway | No. of genes on the pathway | No genes with microarray data | No subpathways |
ATP synthesis | 19 | 6 | 3 |
Bile acid biosynthesis | 46 | 7 | 2 |
Biosynthesis of steroids | 63 | 3 | 2 |
Calcium signalling pathway | 48 | 20 | 7* |
Cell Communication | 17 | 9 | N.A.** |
Cell cycle | 69 | 4 | 2* |
Fatty acid metabolism | 19 | 6 | 1 |
Focal adhesion | 57 | 9 | 5* |
Glutathione metabolism | 30 | 3 | 1 |
Glycerolipid metabolism | 43 | 3 | 1 |
Glycolysis/Gluconeogenesis | 52 | 16 | 2 |
Hedgehog signalling pathway | 19 | 5 | 1 |
Jak-STAT signalling pathway | 27 | 3 | 3*** |
MAPK signalling pathway | 120 | 26 | 3 |
Notch signalling pathway | 24 | 5 | 1 |
Oxidative phosphorylation | 105 | 26 | 3 |
Proteasome | 32 | 7 | 5 |
Purine metabolism | 169 | 6 | 1 |
Ribosome | 142 | 19 | 7**** |
TGF-beta signalling pathway | 55 | 5 | 3***** |
WNT signalling pathway | 70 | 9 | 3 |
*: Genes participate in more than one subpathway
**: Pathway reviews other pathways in a network format
***: Only one subpathway could be analyzed
****: Only four subpathways were analyzed
*****: Only one subpathway was analyzed