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. 2007 Jun 8;8:157. doi: 10.1186/1471-2164-8-157

Table 3.

C. virginica ESTs similar to genes potentially involved in stress response, defense mechanisms and immune response

GenBank Accession no. Putative match Homolog species E-value Hit ID
Stress response
Contig\345 (EH646797 &EH645944) 84 kDa heat shock protein Haliotis tuberculata 7E-78 CAK95235.1
EH646306 CCAAT/enhancer binding protein (C/EBP), gamma Danio rerio 2E-17 NP_571961.1
EH645147 C-type lectin 2 Anguilla japonica 5E-19 BAC54021.1
EH647492 ecto-ATP diphosphohydrolase I Homo sapiens 1E-07 CAB41886.1
Contig\100 (EH644789 &EH646960) ENSANGP00000017916 (belongs to the ubiquitin-conjugating enzyme family) Aedes aegypti 2E-65 XP_310416.4
EH645340 Flap endonuclease 1-B Xenopus laevis 2E-72 P70054
EH646336 growth arrest and DNA damage 45 gamma like Danio rerio 7E-10 NP_998391.1
Contig\310 (EH646499 &EH647053) Homo sapiens ubiquitin-conjugating enzyme E2N synthetic construct 2E-69 AAP36228.1
EH644486 MGC84195 protein Xenopus laevis 8E-29 AAH82452.1
EH646608 Mn superoxide dismutase Biomphalaria glabrata 3E-49 AAS83980.1
EH648076 novel protein similar to vertebrate methionine sulfoxide reductase A Danio rerio 9E-35 CAH68999.1
Contig\517 (EH648399 &EH648432) Peroxiredoxin V protein Branchiostoma belcheri 4E-58 AAM18076.1
EH645663 PREDICTED: E1A binding protein p300 isoform 2 Pan troglodytes 6E-31 XP_001168473.1
EH645265 and EH646835 PREDICTED: hypothetical protein Strongylocentrotus purpuratus 6E-37 XP_001189673.1
EH646242 PREDICTED: hypothetical protein isoform 2 Gallus gallus 1E-07 XP_421849.1
EH645065 PREDICTED: similar to collectin sub-family member 12 isoform II Macaca mulatta 6E-10 XP_001088438.1
EH645286 PREDICTED: similar to cryptochrome 1 (photolyase-like) Tribolium castaneum 1E-39 XP_972654.1
Contig\578 (EH648875 &EH648870) PREDICTED: similar to Der1-like domain family, member 1 Strongylocentrotus purpuratus 2E-70 XP_797383.1
EH646861 PREDICTED: similar to dsRNA adenosine deaminase Strongylocentrotus purpuratus 3E-16 XP_001183590.1
EH646254 PREDICTED: similar to ER degradation-enhancing alpha-mannosidase-like Canis familiaris 6E-58 XP_533753.2
EH646603 PREDICTED: similar to GTP-binding-protein CG5519-PA Apis mellifera 6E-61 XP_392284.2
EH646719 PREDICTED: similar to mitogen-activated protein kinase kinase 7 Apis mellifera 1E-56 XP_396834.1
EH648858 PREDICTED: similar to oxidative stress protein Strongylocentrotus purpuratus 1E-12 XP_001178682.1
EH647765 PREDICTED: similar to scavenger receptor cysteine-rich protein type 12 precursor Strongylocentrotus purpuratus 8E-19 XP_791976.2
EH648904 PREDICTED: similar to stress-induced-phosphoprotein 1 Tribolium castaneum 5E-44 XP_967038.1
EH646424 ring finger protein 7 Gallus gallus 8E-47 NP_001026478.1
EH645238 Unknown Branchiostoma floridae 3E-15 AAM18895.1
EH647041 unnamed protein product Tetraodon nigroviridis 2E-09 CAG05929.1
EH648535 Zgc:153458 Danio rerio 1E-26 AAI24360.1
Immune response
EH647765 PREDICTED: similar to scavenger receptor cysteine-rich protein type 12 precursor, partial Strongylocentrotus purpuratus 8E-19 XP_791976.2
EH645065 PREDICTED: similar to collectin sub-family member 12 isoform II Macaca mulatta 6E-10 XP_001088438.1
EH644243 peptidoglycan recognition protein Biomphalaria glabrata 4E-10 ABK76644.1
EH646861 PREDICTED: similar to dsRNA adenosine deaminase Strongylocentrotus purpuratus 3E-16 XP_001183590.1
EH645147 C-type lectin 2 Anguilla japonica 5E-19 BAC54021.1
EH646306 CCAAT/enhancer binding protein (C/EBP), gamma Danio rerio 2E-17 NP_571961.1
Contig\188 (EH645432 &EH647545) PREDICTED: leukocyte-derived arginine aminopeptidase isoform 3 Pan troglodytes 4E-28 XP_001138283.1
EH648526 PREDICTED: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein isoform 1 Pan troglodytes 4E-34 XP_001142759.1
Contig\517 (EH648399 &EH648432) peroxiredoxin V protein Branchiostoma belcheri 4E-58 AAM18076.1
EH644486 MGC84195 protein Xenopus laevis 8E-29 AAH82452.1
Defense response
EH646306 CCAAT/enhancer binding protein (C/EBP), gamma Danio rerio 2E-17 NP_571961.1
EH645147 C-type lectin 2 Anguilla japonica 5E-19 BAC54021.1
EH645566 Defensin Crassostrea gigas 2E-16 CAJ19280.1
EH645733 Lysozyme Crassostrea virginica 3E-72 BAE47520.1
EH644486 MGC84195 protein Xenopus laevis 8E-29 AAH82452.1
EH644243 Peptidoglycan recognition protein Biomphalaria glabrata 4E-10 ABK76644.1
EH645480 &EH649320 Peptidoglycan recognition protein S1 precursor Chlamys farreri 1E-25 AAY53765.1
Contig\517 (EH648399 &EH648432) Peroxiredoxin V protein Branchiostoma belcheri 4E-58 AAM18076.1
EH648526 PREDICTED: inhibitor of kappa light polypeptide gene enhancer in B-cells Pan troglodytes 4E-34 XP_001142759.1
Contig\188 (EH645432 &EH647545) PREDICTED: leukocyte-derived arginine aminopeptidase isoform 3 Pan troglodytes 4E-28 XP_001138283.1
EH645065 PREDICTED: similar to collectin sub-family member 12 isoform II Macaca mulatta 6E-10 XP_001088438.1
EH646861 PREDICTED: similar to dsRNA adenosine deaminase Strongylocentrotus purpuratus 3E-16 XP_001183590.1
EH647765 PREDICTED: similar to scavenger receptor cysteine-rich protein type 12 precursor Strongylocentrotus purpuratus 8E-19 XP_791976.2