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. 2007 Jun 1;35(12):e84. doi: 10.1093/nar/gkm403

Table 1.

Comparison of throughput in mutation scanninga. Plus the ability to sequence and identify low-level somatic mutations

One sample 16 samples (e.g. Cepheid QRT-PCR machine) 96 samples (96-well QRT-PCR machine) 384 samples (ABI QRT-PCR machine) 3,072 samples (OpenArray™) Detects low-level mutations (1–10% mutant-to-wild type) Nucleotide change and/or position of the mutation
dHPLC/Surveyorb 0.5 h 3-4 h 24 h 96 h 768 h Yes No
s-RT-MELTc 1.5 h 2.0 h 3.0 h 4.0 h 17 h Yes Yes

aPost-PCR treatment time to accomplish pre-screening for unknown mutations.

bSurveyor™ treatment requires ∼15–20 minutes. The dHPLC screens one sample at a time (12-15 minutes/sample including wash).

cAn additional half hour for every batch of 96 samples purified via 96-sample Qiagen purification kit, following Surveyor™ treatment, was accounted for s-RT-MELT.