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. 2007 Jun 7;8:150. doi: 10.1186/1471-2164-8-150

Table 1.

Primer sequences used for gene expression analysis by real time PCR. Amplification was detected by Sybr Green using an Opticon real time PCR machine (BioRad).

Gene Accession number Short name Sequence Annealing temp used Product size
HEPCIDIN BX868476 Ext1F1 TGCAGTGGTACTCGTCCTTG 58 167
Ext1R1 GACGCTTGAACCTGAAATGCTCC
IRF-1 AF332147 IRF-1 F1 CCGCTGTGCAATGAACT 60 285
IRF-1 R1 AGGCTGTCTGTGCTGTCTACTAT
C-TYPE LECTIN DV191936 Ext2tF1 TCTCCTGTCCCATTTTGCTT 58 238
Ext2R1 GATCCGCCATCCACATATTC
PRECEREBELLIN AF192969.2 Ext3F1 GCCTTCTCCGCTTCCTTTAT 58 185
Ext3R1 TTCCCAACATTGCAAGTGAA
IN NFKbeta OMY317969 Exts4F1 GAAGCCACAGAACATGCTGA 58 242
Exts4R1 TGGGTGATCACACTGAAGGA
JUN-B CF752495.1 Ext5F1 TACTGCACTGTTGGGACAGC 58 167
Ext5R1 CAGAATGCCCCGAGTGTTAT
LMP2 AF112117.1 Ext6F1 AAGTTCGTTCAGCTGCCACT 58 234
Ext6R1 GTTGGCAGTCCTCTTTGCTC
TAP1 AF115536 Ext7F1 CCATGAGTCGCATACACACC 58 188
Ext7R1 AGTGACCCGCATGAAGTACC
60S rp L30 CA037550 Ext9F1 GGGATACAAGCAGTCCCAGA 58 211
Ext9R1 GGGTCGATGATAGCCAGTGT
CCAAT/EBP AY144611.1 Exst10F1 CAGCGGGTGTTAAGATCCAT 58 200
Exst10R1 GCAGCAGGAGGATCCAAGTA
TNF rec OMY517804 Ext11F1 CACCGACTGTGGCAAGTCTA 58 227
Ext11R1 GGGTCACAGGTAGGCAGTGT
TAPASIN DQ092322 Ext12F1 GCACGGTGTACTTGCCCTAT 58 188
Ext12R1 AGGCCCTGTTAACTCCCAGT
β-ACTIN AF012125 RTBAEF CCAGGCATCAGGGAGTGA 60 283
RTBAER GTACATGGCAGGGGTGTTGA
ELF-1α AF321836.1 EF1AEF CAAGGATATCCGTCGTGGCA 60 317
EF1aER ACAGCGAAACGACCAAGAGG